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The HTLV-1 viral oncoproteins Tax and HBZ reprogram the cellular mRNA splicing landscape.
Vandermeulen C, O'Grady T, Wayet J, Galvan B, Maseko S, Cherkaoui M, Desbuleux A, Coppin G, Olivet J, Ben Ameur L, Kataoka K, Ogawa S, Hermine O, Marcais A, Thiry M, Mortreux F, Calderwood MA, Van Weyenbergh J, Peloponese JM, Charloteaux B, Van den Broeke A, Hill DE, Vidal M, Dequiedt F, Twizere JC. Vandermeulen C, et al. Among authors: van den broeke a. PLoS Pathog. 2021 Sep 20;17(9):e1009919. doi: 10.1371/journal.ppat.1009919. eCollection 2021 Sep. PLoS Pathog. 2021. PMID: 34543356 Free PMC article.
An Improved Sequencing-Based Bioinformatics Pipeline to Track the Distribution and Clonal Architecture of Proviral Integration Sites.
Rosewick N, Hahaut V, Durkin K, Artesi M, Karpe S, Wayet J, Griebel P, Arsic N, Marçais A, Hermine O, Burny A, Georges M, Van den Broeke A. Rosewick N, et al. Among authors: van den broeke a. Front Microbiol. 2020 Oct 20;11:587306. doi: 10.3389/fmicb.2020.587306. eCollection 2020. Front Microbiol. 2020. PMID: 33193242 Free PMC article.
Monitoring molecular response in adult T-cell leukemia by high-throughput sequencing analysis of HTLV-1 clonality.
Artesi M, Marçais A, Durkin K, Rosewick N, Hahaut V, Suarez F, Trinquand A, Lhermitte L, Asnafi V, Avettand-Fenoel V, Burny A, Georges M, Hermine O, Van den Broeke A. Artesi M, et al. Among authors: van den broeke a. Leukemia. 2017 Nov;31(11):2532-2535. doi: 10.1038/leu.2017.260. Epub 2017 Aug 16. Leukemia. 2017. PMID: 28811663 Free PMC article. No abstract available.
Targeted deep sequencing reveals clonal and subclonal mutational signatures in Adult T-cell leukemia/lymphoma and defines an unfavorable indolent subtype.
Marçais A, Lhermitte L, Artesi M, Laurent C, Durkin K, Hahaut V, Rosewick N, Suarez F, Sibon D, Cheminant M, Avettand-Fenoel V, Bruneau J, Georges M, Pique C, Van den Broeke A, Asnafi V, Hermine O. Marçais A, et al. Among authors: van den broeke a. Leukemia. 2021 Mar;35(3):764-776. doi: 10.1038/s41375-020-0900-3. Epub 2020 Jun 17. Leukemia. 2021. PMID: 32555298 Free article.
PCIP-seq: simultaneous sequencing of integrated viral genomes and their insertion sites with long reads.
Artesi M, Hahaut V, Cole B, Lambrechts L, Ashrafi F, Marçais A, Hermine O, Griebel P, Arsic N, van der Meer F, Burny A, Bron D, Bianchi E, Delvenne P, Bours V, Charlier C, Georges M, Vandekerckhove L, Van den Broeke A, Durkin K. Artesi M, et al. Among authors: van den broeke a. Genome Biol. 2021 Apr 6;22(1):97. doi: 10.1186/s13059-021-02307-0. Genome Biol. 2021. PMID: 33823910 Free PMC article.
NK cells and monocytes modulate primary HTLV-1 infection.
Moles R, Sarkis S, Galli V, Omsland M, Artesi M, Bissa M, McKinnon K, Brown S, Hahaut V, Washington-Parks R, Welsh J, Venzon DJ, Gutowska A, Doster MN, Breed MW, Killoran KE, Kramer J, Jones J, Moniuszko M, Van den Broeke A, Pise-Masison CA, Franchini G. Moles R, et al. Among authors: van den broeke a. PLoS Pathog. 2022 Apr 4;18(4):e1010416. doi: 10.1371/journal.ppat.1010416. eCollection 2022 Apr. PLoS Pathog. 2022. PMID: 35377924 Free PMC article.
Deep sequencing reveals abundant noncanonical retroviral microRNAs in B-cell leukemia/lymphoma.
Rosewick N, Momont M, Durkin K, Takeda H, Caiment F, Cleuter Y, Vernin C, Mortreux F, Wattel E, Burny A, Georges M, Van den Broeke A. Rosewick N, et al. Among authors: van den broeke a. Proc Natl Acad Sci U S A. 2013 Feb 5;110(6):2306-11. doi: 10.1073/pnas.1213842110. Epub 2013 Jan 23. Proc Natl Acad Sci U S A. 2013. PMID: 23345446 Free PMC article.
Characterization of novel Bovine Leukemia Virus (BLV) antisense transcripts by deep sequencing reveals constitutive expression in tumors and transcriptional interaction with viral microRNAs.
Durkin K, Rosewick N, Artesi M, Hahaut V, Griebel P, Arsic N, Burny A, Georges M, Van den Broeke A. Durkin K, et al. Among authors: van den broeke a. Retrovirology. 2016 May 3;13(1):33. doi: 10.1186/s12977-016-0267-8. Retrovirology. 2016. PMID: 27141823 Free PMC article.
57 results