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Genomic and functional analyses of fungal and bacterial consortia that enable lignocellulose breakdown in goat gut microbiomes.
Peng X, Wilken SE, Lankiewicz TS, Gilmore SP, Brown JL, Henske JK, Swift CL, Salamov A, Barry K, Grigoriev IV, Theodorou MK, Valentine DL, O'Malley MA. Peng X, et al. Among authors: swift cl. Nat Microbiol. 2021 Apr;6(4):499-511. doi: 10.1038/s41564-020-00861-0. Epub 2021 Feb 1. Nat Microbiol. 2021. PMID: 33526884 Free PMC article.
Harnessing Nature's Anaerobes for Biotechnology and Bioprocessing.
Podolsky IA, Seppälä S, Lankiewicz TS, Brown JL, Swift CL, O'Malley MA. Podolsky IA, et al. Among authors: swift cl. Annu Rev Chem Biomol Eng. 2019 Jun 7;10:105-128. doi: 10.1146/annurev-chembioeng-060718-030340. Epub 2019 Mar 18. Annu Rev Chem Biomol Eng. 2019. PMID: 30883214 Review.
Lipo-chitooligosaccharides as regulatory signals of fungal growth and development.
Rush TA, Puech-Pagès V, Bascaules A, Jargeat P, Maillet F, Haouy A, Maës AQ, Carriel CC, Khokhani D, Keller-Pearson M, Tannous J, Cope KR, Garcia K, Maeda J, Johnson C, Kleven B, Choudhury QJ, Labbé J, Swift C, O'Malley MA, Bok JW, Cottaz S, Fort S, Poinsot V, Sussman MR, Lefort C, Nett J, Keller NP, Bécard G, Ané JM. Rush TA, et al. Nat Commun. 2020 Aug 4;11(1):3897. doi: 10.1038/s41467-020-17615-5. Nat Commun. 2020. PMID: 32753587 Free PMC article.
Anaerobic gut fungi are an untapped reservoir of natural products.
Swift CL, Louie KB, Bowen BP, Olson HM, Purvine SO, Salamov A, Mondo SJ, Solomon KV, Wright AT, Northen TR, Grigoriev IV, Keller NP, O'Malley MA. Swift CL, et al. Proc Natl Acad Sci U S A. 2021 May 4;118(18):e2019855118. doi: 10.1073/pnas.2019855118. Proc Natl Acad Sci U S A. 2021. PMID: 33906945 Free PMC article.
Co‑cultivation of the anaerobic fungus Caecomyces churrovis with Methanobacterium bryantii enhances transcription of carbohydrate binding modules, dockerins, and pyruvate formate lyases on specific substrates.
Brown JL, Swift CL, Mondo SJ, Seppala S, Salamov A, Singan V, Henrissat B, Drula E, Henske JK, Lee S, LaButti K, He G, Yan M, Barry K, Grigoriev IV, O'Malley MA. Brown JL, et al. Among authors: swift cl. Biotechnol Biofuels. 2021 Dec 10;14(1):234. doi: 10.1186/s13068-021-02083-w. Biotechnol Biofuels. 2021. PMID: 34893091 Free PMC article.
Lignin deconstruction by anaerobic fungi.
Lankiewicz TS, Choudhary H, Gao Y, Amer B, Lillington SP, Leggieri PA, Brown JL, Swift CL, Lipzen A, Na H, Amirebrahimi M, Theodorou MK, Baidoo EEK, Barry K, Grigoriev IV, Timokhin VI, Gladden J, Singh S, Mortimer JC, Ralph J, Simmons BA, Singer SW, O'Malley MA. Lankiewicz TS, et al. Among authors: swift cl. Nat Microbiol. 2023 Apr;8(4):596-610. doi: 10.1038/s41564-023-01336-8. Epub 2023 Mar 9. Nat Microbiol. 2023. PMID: 36894634 Free PMC article.
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