Snyder DJ - Search Results

1

Genomic Diversity of Hospital-Acquired Infections Revealed through Prospective Whole-Genome Sequencing-Based Surveillance.

Mustapha MM, Srinivasa VR, Griffith MP, Cho ST, Evans DR, Waggle K, Ezeonwuka C, Snyder DJ, Marsh JW, Harrison LH, Cooper VS, Van Tyne D. Mustapha MM, et al. Among authors: snyder dj. mSystems. 2022 Jun 28;7(3):e0138421. doi: 10.1128/msystems.01384-21. Epub 2022 Jun 13. mSystems. 2022. PMID: 35695507 Free PMC article.

2

Whole-Genome Sequencing Surveillance and Machine Learning of the Electronic Health Record for Enhanced Healthcare Outbreak Detection.

Sundermann AJ, Chen J, Kumar P, Ayres AM, Cho ST, Ezeonwuka C, Griffith MP, Miller JK, Mustapha MM, Pasculle AW, Saul MI, Shutt KA, Srinivasa V, Waggle K, Snyder DJ, Cooper VS, Van Tyne D, Snyder GM, Marsh JW, Dubrawski A, Roberts MS, Harrison LH. Sundermann AJ, et al. Among authors: snyder dj, snyder gm. Clin Infect Dis. 2022 Aug 31;75(3):476-482. doi: 10.1093/cid/ciab946. Clin Infect Dis. 2022. PMID: 34791136 Free PMC article.

3

Genomic and Chemical Diversity of Bacillus subtilis Secondary Metabolites against Plant Pathogenic Fungi.

Kiesewalter HT, Lozano-Andrade CN, Wibowo M, Strube ML, Maróti G, Snyder D, Jørgensen TS, Larsen TO, Cooper VS, Weber T, Kovács ÁT. Kiesewalter HT, et al. mSystems. 2021 Feb 23;6(1):e00770-20. doi: 10.1128/mSystems.00770-20. mSystems. 2021. PMID: 33622852 Free PMC article.

4

Genomic characterization of SARS-CoV-2 from vaccine breakthrough cases in Allegheny County, Pennsylvania.

Waggle KD, Griffith MP, Zhu L, Cooper VS, Snyder DJ, Srinivasa V, Phan T, Wells A, Snyder GM, Van Tyne D, Harrison LH, Marsh JW. Waggle KD, et al. Among authors: snyder dj. PLoS One. 2022 Aug 31;17(8):e0272954. doi: 10.1371/journal.pone.0272954. eCollection 2022. PLoS One. 2022. PMID: 36044529 Free PMC article.

5

Clostridioides difficile: a potential source of NpmA in the clinical environment.

Marsh JW, Pacey MP, Ezeonwuka C, Ohm SL, Snyder D, Cooper VS, Harrison LH, Doi Y, Mustapha MM. Marsh JW, et al. J Antimicrob Chemother. 2019 Feb 1;74(2):521-523. doi: 10.1093/jac/dky420. J Antimicrob Chemother. 2019. PMID: 30295814 Free PMC article. No abstract available.

6

Evolutionary pathways to antibiotic resistance are dependent upon environmental structure and bacterial lifestyle.

Santos-Lopez A, Marshall CW, Scribner MR, Snyder DJ, Cooper VS. Santos-Lopez A, et al. Among authors: snyder dj. Elife. 2019 Sep 13;8:e47612. doi: 10.7554/eLife.47612. Elife. 2019. PMID: 31516122 Free PMC article.

7

Genome-wide analysis of influenza viral RNA and nucleoprotein association.

Lee N, Le Sage V, Nanni AV, Snyder DJ, Cooper VS, Lakdawala SS. Lee N, et al. Among authors: snyder dj. Nucleic Acids Res. 2017 Sep 6;45(15):8968-8977. doi: 10.1093/nar/gkx584. Nucleic Acids Res. 2017. PMID: 28911100 Free PMC article.

8

Expression of myeloid Src-family kinases is associated with poor prognosis in AML and influences Flt3-ITD kinase inhibitor acquired resistance.

Patel RK, Weir MC, Shen K, Snyder D, Cooper VS, Smithgall TE. Patel RK, et al. PLoS One. 2019 Dec 2;14(12):e0225887. doi: 10.1371/journal.pone.0225887. eCollection 2019. PLoS One. 2019. PMID: 31790499 Free PMC article.

9

Pseudomonas aeruginosa Interstrain Dynamics and Selection of Hyperbiofilm Mutants during a Chronic Infection.

Gloag ES, Marshall CW, Snyder D, Lewin GR, Harris JS, Santos-Lopez A, Chaney SB, Whiteley M, Cooper VS, Wozniak DJ. Gloag ES, et al. Among authors: snyder d. mBio. 2019 Aug 13;10(4):e01698-19. doi: 10.1128/mBio.01698-19. mBio. 2019. PMID: 31409682 Free PMC article.

10

Mutations that improve efficiency of a weak-link enzyme are rare compared to adaptive mutations elsewhere in the genome.

Morgenthaler AB, Kinney WR, Ebmeier CC, Walsh CM, Snyder DJ, Cooper VS, Old WM, Copley SD. Morgenthaler AB, et al. Among authors: snyder dj. Elife. 2019 Dec 9;8:e53535. doi: 10.7554/eLife.53535. Elife. 2019. PMID: 31815667 Free PMC article.

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