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Major data analysis errors invalidate cancer microbiome findings.
Gihawi A, Ge Y, Lu J, Puiu D, Xu A, Cooper CS, Brewer DS, Pertea M, Salzberg SL. Gihawi A, et al. Among authors: salzberg sl. mBio. 2023 Oct 31;14(5):e0160723. doi: 10.1128/mbio.01607-23. Epub 2023 Oct 9. mBio. 2023. PMID: 37811944 Free PMC article.
Interpolated Markov models for eukaryotic gene finding.
Salzberg SL, Pertea M, Delcher AL, Gardner MJ, Tettelin H. Salzberg SL, et al. Genomics. 1999 Jul 1;59(1):24-31. doi: 10.1006/geno.1999.5854. Genomics. 1999. PMID: 10395796 Free article.
Finding genes in Plasmodium falciparum.
Pertea M, Salzberg SL, Gardner MJ. Pertea M, et al. Among authors: salzberg sl. Nature. 2000 Mar 2;404(6773):34; discussion 34-5. doi: 10.1038/35003643. Nature. 2000. PMID: 10716431 No abstract available.
Computational gene finding in plants.
Pertea M, Salzberg SL. Pertea M, et al. Among authors: salzberg sl. Plant Mol Biol. 2002 Jan;48(1-2):39-48. Plant Mol Biol. 2002. PMID: 11860211 Review.
Genome sequence and rapid evolution of the rice pathogen Xanthomonas oryzae pv. oryzae PXO99A.
Salzberg SL, Sommer DD, Schatz MC, Phillippy AM, Rabinowicz PD, Tsuge S, Furutani A, Ochiai H, Delcher AL, Kelley D, Madupu R, Puiu D, Radune D, Shumway M, Trapnell C, Aparna G, Jha G, Pandey A, Patil PB, Ishihara H, Meyer DF, Szurek B, Verdier V, Koebnik R, Dow JM, Ryan RP, Hirata H, Tsuyumu S, Won Lee S, Seo YS, Sriariyanum M, Ronald PC, Sonti RV, Van Sluys MA, Leach JE, White FF, Bogdanove AJ. Salzberg SL, et al. BMC Genomics. 2008 May 1;9:204. doi: 10.1186/1471-2164-9-204. BMC Genomics. 2008. PMID: 18452608 Free PMC article.
286 results