Reddy ASN - Search Results

1

A high-resolution single-molecule sequencing-based Arabidopsis transcriptome using novel methods of Iso-seq analysis.

Zhang R, Kuo R, Coulter M, Calixto CPG, Entizne JC, Guo W, Marquez Y, Milne L, Riegler S, Matsui A, Tanaka M, Harvey S, Gao Y, Wießner-Kroh T, Paniagua A, Crespi M, Denby K, Hur AB, Huq E, Jantsch M, Jarmolowski A, Koester T, Laubinger S, Li QQ, Gu L, Seki M, Staiger D, Sunkar R, Szweykowska-Kulinska Z, Tu SL, Wachter A, Waugh R, Xiong L, Zhang XN, Conesa A, Reddy ASN, Barta A, Kalyna M, Brown JWS. Zhang R, et al. Among authors: reddy asn. Genome Biol. 2022 Jul 7;23(1):149. doi: 10.1186/s13059-022-02711-0. Genome Biol. 2022. PMID: 35799267 Free PMC article.

2

Alternative splicing of pre-mRNAs of Arabidopsis serine/arginine-rich proteins: regulation by hormones and stresses.

Palusa SG, Ali GS, Reddy AS. Palusa SG, et al. Plant J. 2007 Mar;49(6):1091-107. doi: 10.1111/j.1365-313X.2006.03020.x. Epub 2007 Feb 22. Plant J. 2007. PMID: 17319848 Free article.

3

Implementing a rational and consistent nomenclature for serine/arginine-rich protein splicing factors (SR proteins) in plants.

Barta A, Kalyna M, Reddy AS. Barta A, et al. Plant Cell. 2010 Sep;22(9):2926-9. doi: 10.1105/tpc.110.078352. Epub 2010 Sep 30. Plant Cell. 2010. PMID: 20884799 Free PMC article.

4

Localization and dynamics of nuclear speckles in plants.

Reddy AS, Day IS, Göhring J, Barta A. Reddy AS, et al. Plant Physiol. 2012 Jan;158(1):67-77. doi: 10.1104/pp.111.186700. Epub 2011 Nov 1. Plant Physiol. 2012. PMID: 22045923 Free PMC article. Review. No abstract available.

5

SpliceGrapher: detecting patterns of alternative splicing from RNA-Seq data in the context of gene models and EST data.

Rogers MF, Thomas J, Reddy AS, Ben-Hur A. Rogers MF, et al. Genome Biol. 2012 Jan 31;13(1):R4. doi: 10.1186/gb-2012-13-1-r4. Genome Biol. 2012. PMID: 22293517 Free PMC article.

6

Identification of an intronic splicing regulatory element involved in auto-regulation of alternative splicing of SCL33 pre-mRNA.

Thomas J, Palusa SG, Prasad KV, Ali GS, Surabhi GK, Ben-Hur A, Abdel-Ghany SE, Reddy AS. Thomas J, et al. Plant J. 2012 Dec;72(6):935-46. doi: 10.1111/tpj.12004. Epub 2012 Oct 29. Plant J. 2012. PMID: 22913769 Free article.

7

Complexity of the alternative splicing landscape in plants.

Reddy AS, Marquez Y, Kalyna M, Barta A. Reddy AS, et al. Plant Cell. 2013 Oct;25(10):3657-83. doi: 10.1105/tpc.113.117523. Epub 2013 Oct 31. Plant Cell. 2013. PMID: 24179125 Free PMC article. Review.

8

Transcriptome-Wide Identification of RNA Targets of Arabidopsis SERINE/ARGININE-RICH45 Uncovers the Unexpected Roles of This RNA Binding Protein in RNA Processing.

Xing D, Wang Y, Hamilton M, Ben-Hur A, Reddy AS. Xing D, et al. Plant Cell. 2015 Dec;27(12):3294-308. doi: 10.1105/tpc.15.00641. Epub 2015 Nov 24. Plant Cell. 2015. PMID: 26603559 Free PMC article.

9

Global gene expression analysis using RNA-seq uncovered a new role for SR1/CAMTA3 transcription factor in salt stress.

Prasad KVSK, Abdel-Hameed AAE, Xing D, Reddy ASN. Prasad KVSK, et al. Among authors: reddy asn. Sci Rep. 2016 Jun 2;6:27021. doi: 10.1038/srep27021. Sci Rep. 2016. PMID: 27251464 Free PMC article.

10

A survey of the sorghum transcriptome using single-molecule long reads.

Abdel-Ghany SE, Hamilton M, Jacobi JL, Ngam P, Devitt N, Schilkey F, Ben-Hur A, Reddy AS. Abdel-Ghany SE, et al. Nat Commun. 2016 Jun 24;7:11706. doi: 10.1038/ncomms11706. Nat Commun. 2016. PMID: 27339290 Free PMC article.

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