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Page 1
Ovarian cancer mutational processes drive site-specific immune evasion.
Vázquez-García I, Uhlitz F, Ceglia N, Lim JLP, Wu M, Mohibullah N, Niyazov J, Ruiz AEB, Boehm KM, Bojilova V, Fong CJ, Funnell T, Grewal D, Havasov E, Leung S, Pasha A, Patel DM, Pourmaleki M, Rusk N, Shi H, Vanguri R, Williams MJ, Zhang AW, Broach V, Chi DS, Da Cruz Paula A, Gardner GJ, Kim SH, Lennon M, Long Roche K, Sonoda Y, Zivanovic O, Kundra R, Viale A, Derakhshan FN, Geneslaw L, Issa Bhaloo S, Maroldi A, Nunez R, Pareja F, Stylianou A, Vahdatinia M, Bykov Y, Grisham RN, Liu YL, Lakhman Y, Nikolovski I, Kelly D, Gao J, Schietinger A, Hollmann TJ, Bakhoum SF, Soslow RA, Ellenson LH, Abu-Rustum NR, Aghajanian C, Friedman CF, McPherson A, Weigelt B, Zamarin D, Shah SP. Vázquez-García I, et al. Among authors: pasha a. Nature. 2022 Dec;612(7941):778-786. doi: 10.1038/s41586-022-05496-1. Epub 2022 Dec 14. Nature. 2022. PMID: 36517593 Free PMC article.
Semisupervised Training of a Brain MRI Tumor Detection Model Using Mined Annotations.
Swinburne NC, Yadav V, Kim J, Choi YR, Gutman DC, Yang JT, Moss N, Stone J, Tisnado J, Hatzoglou V, Haque SS, Karimi S, Lyo J, Juluru K, Pichotta K, Gao J, Shah SP, Holodny AI, Young RJ; MSK MIND Consortium. Swinburne NC, et al. Radiology. 2022 Apr;303(1):80-89. doi: 10.1148/radiol.210817. Epub 2022 Jan 18. Radiology. 2022. PMID: 35040676 Free PMC article.
Multimodal data integration using machine learning improves risk stratification of high-grade serous ovarian cancer.
Boehm KM, Aherne EA, Ellenson L, Nikolovski I, Alghamdi M, Vázquez-García I, Zamarin D, Long Roche K, Liu Y, Patel D, Aukerman A, Pasha A, Rose D, Selenica P, Causa Andrieu PI, Fong C, Capanu M, Reis-Filho JS, Vanguri R, Veeraraghavan H, Gangai N, Sosa R, Leung S, McPherson A, Gao J; MSK MIND Consortium; Lakhman Y, Shah SP. Boehm KM, et al. Among authors: pasha a. Nat Cancer. 2022 Jun;3(6):723-733. doi: 10.1038/s43018-022-00388-9. Epub 2022 Jun 28. Nat Cancer. 2022. PMID: 35764743 Free PMC article.
Fast, light, and scalable: harnessing data-mined line annotations for automated tumor segmentation on brain MRI.
Swinburne NC, Yadav V, Murthy KNK, Elnajjar P, Shih HH, Panyam PK, Santilli A, Gutman DC, Pike L, Moss NS, Stone J, Hatzoglou V, Shah A, Juluru K, Shah SP, Holodny AI, Young RJ; M.S.K. MIND Consortium. Swinburne NC, et al. Eur Radiol. 2023 Sep;33(9):6582-6591. doi: 10.1007/s00330-023-09583-3. Epub 2023 Apr 12. Eur Radiol. 2023. PMID: 37042979 Free PMC article.
The transcriptome landscape of developing barley seeds.
Kovacik M, Nowicka A, Zwyrtková J, Strejčková B, Vardanega I, Esteban E, Pasha A, Kaduchová K, Krautsova M, Červenková M, Šafář J, Provart NJ, Simon R, Pecinka A. Kovacik M, et al. Among authors: pasha a. Plant Cell. 2024 Apr 18:koae095. doi: 10.1093/plcell/koae095. Online ahead of print. Plant Cell. 2024. PMID: 38635902
Nutri-cereal tissue-specific transcriptome atlas during development: Functional integration of gene expression to identify mineral uptake pathways in little millet (Panicum sumatrense).
Pahari S, Vaid N, Soolanayakanahally R, Kagale S, Pasha A, Esteban E, Provart N, Stobbs JA, Vu M, Meira D, Karunakaran C, Boda P, Prasannakumar MK, Nagaraja A, Jain AK. Pahari S, et al. Among authors: pasha a. Plant J. 2024 Apr 4. doi: 10.1111/tpj.16749. Online ahead of print. Plant J. 2024. PMID: 38576267
232 results