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Systematic assessment of long-read RNA-seq methods for transcript identification and quantification.
Pardo-Palacios FJ, Wang D, Reese F, Diekhans M, Carbonell-Sala S, Williams B, Loveland JE, De María M, Adams MS, Balderrama-Gutierrez G, Behera AK, Gonzalez JM, Hunt T, Lagarde J, Liang CE, Li H, Jerryd Meade M, Moraga Amador DA, Prjibelski AD, Birol I, Bostan H, Brooks AM, Hasan Çelik M, Chen Y, Du MRM, Felton C, Göke J, Hafezqorani S, Herwig R, Kawaji H, Lee J, Liang Li J, Lienhard M, Mikheenko A, Mulligan D, Ming Nip K, Pertea M, Ritchie ME, Sim AD, Tang AD, Kei Wan Y, Wang C, Wong BY, Yang C, Barnes I, Berry A, Capella S, Dhillon N, Fernandez-Gonzalez JM, Ferrández-Peral L, Garcia-Reyero N, Goetz S, Hernández-Ferrer C, Kondratova L, Liu T, Martinez-Martin A, Menor C, Mestre-Tomás J, Mudge JM, Panayotova NG, Paniagua A, Repchevsky D, Rouchka E, Saint-John B, Sapena E, Sheynkman L, Laird Smith M, Suner MM, Takahashi H, Youngworth IA, Carninci P, Denslow ND, Guigó R, Hunter ME, Tilgner HU, Wold BJ, Vollmers C, Frankish A, Fai Au K, Sheynkman GM, Mortazavi A, Conesa A, Brooks AN. Pardo-Palacios FJ, et al. Among authors: moraga amador da. bioRxiv [Preprint]. 2023 Jul 27:2023.07.25.550582. doi: 10.1101/2023.07.25.550582. bioRxiv. 2023. PMID: 37546854 Free PMC article. Preprint.
Production and viscosity of Xanthan Gum are increased by LED irradiation of X. campestris cultivated in medium containing produced water of the oil industry.
Crugeira PJL, de Almeida PF, Sampaio ICF, Soares LGP, Moraga Amador DA, Samuel IDW, Persheyev S, Silveira L Jr, Pinheiro ALB. Crugeira PJL, et al. Among authors: moraga amador da. J Photochem Photobiol B. 2022 Jan;226:112356. doi: 10.1016/j.jphotobiol.2021.112356. Epub 2021 Nov 12. J Photochem Photobiol B. 2022. PMID: 34801926
Effects of photo-stimulation with laser or LED on the composition of Xanthan gum produced in media containing distilled water or dialyzed or not produced water by means of Raman spectroscopy.
Pinheiro ALB, de Almeida PF, Sampaio ICF, Crugeira PJL, Dos Santos JN, Matos JBTL, Soares LGP, Moraga Amador DA, Silveira L Jr. Pinheiro ALB, et al. Among authors: moraga amador da. J Photochem Photobiol B. 2020 Dec;213:112057. doi: 10.1016/j.jphotobiol.2020.112057. Epub 2020 Oct 17. J Photochem Photobiol B. 2020. PMID: 33142219
Asparagine catabolism in rat liver mitochondria.
Moraga-Amador DA, MacPhee-Quiggley KM, Keefer JF, Schuster SM. Moraga-Amador DA, et al. Arch Biochem Biophys. 1989 Jan;268(1):314-26. doi: 10.1016/0003-9861(89)90593-6. Arch Biochem Biophys. 1989. PMID: 2912380