Lee J - Search Results

1

Identification of new marker genes from plant single-cell RNA-seq data using interpretable machine learning methods.

Yan H, Lee J, Song Q, Li Q, Schiefelbein J, Zhao B, Li S. Yan H, et al. Among authors: lee j. New Phytol. 2022 May;234(4):1507-1520. doi: 10.1111/nph.18053. Epub 2022 Mar 26. New Phytol. 2022. PMID: 35211979 Free PMC article.

2

Prediction of condition-specific regulatory genes using machine learning.

Song Q, Lee J, Akter S, Rogers M, Grene R, Li S. Song Q, et al. Among authors: lee j. Nucleic Acids Res. 2020 Jun 19;48(11):e62. doi: 10.1093/nar/gkaa264. Nucleic Acids Res. 2020. PMID: 32329779 Free PMC article.

3

Single Cell RNA-Seq and Machine Learning Reveal Novel Subpopulations in Low-Grade Inflammatory Monocytes With Unique Regulatory Circuits.

Lee J, Geng S, Li S, Li L. Lee J, et al. Front Immunol. 2021 Feb 23;12:627036. doi: 10.3389/fimmu.2021.627036. eCollection 2021. Front Immunol. 2021. PMID: 33708217 Free PMC article.

4

Identification of Gene Regulatory Networks from Single-Cell Expression Data.

Li S, Yan H, Lee J. Li S, et al. Among authors: lee j. Methods Mol Biol. 2021;2328:153-170. doi: 10.1007/978-1-0716-1534-8_9. Methods Mol Biol. 2021. PMID: 34251624

5

A diffusion-based microfluidic device for single-cell RNA-seq.

Sarma M, Lee J, Ma S, Li S, Lu C. Sarma M, et al. Among authors: lee j. Lab Chip. 2019 Mar 27;19(7):1247-1256. doi: 10.1039/c8lc00967h. Lab Chip. 2019. PMID: 30815639 Free PMC article.

6

Comparing time series transcriptome data between plants using a network module finding algorithm.

Lee J, Heath LS, Grene R, Li S. Lee J, et al. Plant Methods. 2019 Jun 1;15:61. doi: 10.1186/s13007-019-0440-x. eCollection 2019. Plant Methods. 2019. PMID: 31164912 Free PMC article.

7

Retinoic Acid Exerts Disease Stage-Dependent Effects on Pristane-Induced Lupus.

Abdelhamid L, Cabana-Puig X, Swartwout B, Lee J, Li S, Sun S, Li Y, Ross AC, Cecere TE, LeRoith T, Werre SR, Wang H, Reilly CM, Luo XM. Abdelhamid L, et al. Among authors: lee j. Front Immunol. 2020 Mar 20;11:408. doi: 10.3389/fimmu.2020.00408. eCollection 2020. Front Immunol. 2020. PMID: 32265909 Free PMC article.

8

Antibiotics ameliorate lupus-like symptoms in mice.

Mu Q, Tavella VJ, Kirby JL, Cecere TE, Chung M, Lee J, Li S, Ahmed SA, Eden K, Allen IC, Reilly CM, Luo XM. Mu Q, et al. Among authors: lee j. Sci Rep. 2017 Oct 20;7(1):13675. doi: 10.1038/s41598-017-14223-0. Sci Rep. 2017. PMID: 29057975 Free PMC article.

9

Evolutionary superscaffolding and chromosome anchoring to improve Anopheles genome assemblies.

Waterhouse RM, Aganezov S, Anselmetti Y, Lee J, Ruzzante L, Reijnders MJMF, Feron R, Bérard S, George P, Hahn MW, Howell PI, Kamali M, Koren S, Lawson D, Maslen G, Peery A, Phillippy AM, Sharakhova MV, Tannier E, Unger MF, Zhang SV, Alekseyev MA, Besansky NJ, Chauve C, Emrich SJ, Sharakhov IV. Waterhouse RM, et al. Among authors: lee j. BMC Biol. 2020 Jan 2;18(1):1. doi: 10.1186/s12915-019-0728-3. BMC Biol. 2020. PMID: 31898513 Free PMC article.

10

Increased production of piRNAs from euchromatic clusters and genes in Anopheles gambiae compared with Drosophila melanogaster.

George P, Jensen S, Pogorelcnik R, Lee J, Xing Y, Brasset E, Vaury C, Sharakhov IV. George P, et al. Among authors: lee j. Epigenetics Chromatin. 2015 Nov 27;8:50. doi: 10.1186/s13072-015-0041-5. eCollection 2015. Epigenetics Chromatin. 2015. PMID: 26617674 Free PMC article.

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