Islam B - Search Results

1

Mechanistic Insights into the Ligand-Induced Unfolding of an RNA G-Quadruplex.

Haldar S, Zhang Y, Xia Y, Islam B, Liu S, Gervasio FL, Mulholland AJ, Waller ZAE, Wei D, Haider S. Haldar S, et al. Among authors: islam b. J Am Chem Soc. 2022 Jan 19;144(2):935-950. doi: 10.1021/jacs.1c11248. Epub 2022 Jan 6. J Am Chem Soc. 2022. PMID: 34989224

2

Selective recognition of c-MYC Pu22 G-quadruplex by a fluorescent probe.

Zhai Q, Gao C, Ding J, Zhang Y, Islam B, Lan W, Hou H, Deng H, Li J, Hu Z, Mohamed HI, Xu S, Cao C, Haider SM, Wei D. Zhai Q, et al. Among authors: islam b. Nucleic Acids Res. 2019 Mar 18;47(5):2190-2204. doi: 10.1093/nar/gkz059. Nucleic Acids Res. 2019. PMID: 30759259 Free PMC article.

3

Extended molecular dynamics of a c-kit promoter quadruplex.

Islam B, Stadlbauer P, Krepl M, Koca J, Neidle S, Haider S, Sponer J. Islam B, et al. Nucleic Acids Res. 2015 Oct 15;43(18):8673-93. doi: 10.1093/nar/gkv785. Epub 2015 Aug 5. Nucleic Acids Res. 2015. PMID: 26245347 Free PMC article.

4

Can We Execute Reliable MM-PBSA Free Energy Computations of Relative Stabilities of Different Guanine Quadruplex Folds?

Islam B, Stadlbauer P, Neidle S, Haider S, Sponer J. Islam B, et al. J Phys Chem B. 2016 Mar 24;120(11):2899-912. doi: 10.1021/acs.jpcb.6b01059. Epub 2016 Mar 11. J Phys Chem B. 2016. PMID: 26918369 Free article.

5

Structural Dynamics of Lateral and Diagonal Loops of Human Telomeric G-Quadruplexes in Extended MD Simulations.

Islam B, Stadlbauer P, Krepl M, Havrila M, Haider S, Sponer J. Islam B, et al. J Chem Theory Comput. 2018 Oct 9;14(10):5011-5026. doi: 10.1021/acs.jctc.8b00543. Epub 2018 Sep 28. J Chem Theory Comput. 2018. PMID: 30183284

6

Dominant Driving Forces in Human Telomere Quadruplex Binding-Induced Structural Alterations.

Bončina M, Hamon F, Islam B, Teulade-Fichou MP, Vesnaver G, Haider S, Lah J. Bončina M, et al. Among authors: islam b. Biophys J. 2015 Jun 16;108(12):2903-11. doi: 10.1016/j.bpj.2015.05.001. Biophys J. 2015. PMID: 26083930 Free PMC article.

7

Exploring the Dynamics of Propeller Loops in Human Telomeric DNA Quadruplexes Using Atomistic Simulations.

Islam B, Stadlbauer P, Gil-Ley A, Pérez-Hernández G, Haider S, Neidle S, Bussi G, Banas P, Otyepka M, Sponer J. Islam B, et al. J Chem Theory Comput. 2017 Jun 13;13(6):2458-2480. doi: 10.1021/acs.jctc.7b00226. Epub 2017 May 18. J Chem Theory Comput. 2017. PMID: 28475322 Free PMC article.

8

Conformational dynamics of the human propeller telomeric DNA quadruplex on a microsecond time scale.

Islam B, Sgobba M, Laughton C, Orozco M, Sponer J, Neidle S, Haider S. Islam B, et al. Nucleic Acids Res. 2013 Feb 1;41(4):2723-35. doi: 10.1093/nar/gks1331. Epub 2013 Jan 4. Nucleic Acids Res. 2013. PMID: 23293000 Free PMC article.

9

Folding of guanine quadruplex molecules-funnel-like mechanism or kinetic partitioning? An overview from MD simulation studies.

Šponer J, Bussi G, Stadlbauer P, Kührová P, Banáš P, Islam B, Haider S, Neidle S, Otyepka M. Šponer J, et al. Among authors: islam b. Biochim Biophys Acta Gen Subj. 2017 May;1861(5 Pt B):1246-1263. doi: 10.1016/j.bbagen.2016.12.008. Epub 2016 Dec 13. Biochim Biophys Acta Gen Subj. 2017. PMID: 27979677 Free article. Review.

10

Dynamic Profiling of β-Coronavirus 3CL M^pro Protease Ligand-Binding Sites.

Cho E, Rosa M, Anjum R, Mehmood S, Soban M, Mujtaba M, Bux K, Moin ST, Tanweer M, Dantu S, Pandini A, Yin J, Ma H, Ramanathan A, Islam B, Mey ASJS, Bhowmik D, Haider S. Cho E, et al. Among authors: islam b. J Chem Inf Model. 2021 Jun 28;61(6):3058-3073. doi: 10.1021/acs.jcim.1c00449. Epub 2021 Jun 14. J Chem Inf Model. 2021. PMID: 34124899

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