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Genome-wide Mycobacterium tuberculosis variation (GMTV) database: a new tool for integrating sequence variations and epidemiology.
Chernyaeva EN, Shulgina MV, Rotkevich MS, Dobrynin PV, Simonov SA, Shitikov EA, Ischenko DS, Karpova IY, Kostryukova ES, Ilina EN, Govorun VM, Zhuravlev VY, Manicheva OA, Yablonsky PK, Isaeva YD, Nosova EY, Mokrousov IV, Vyazovaya AA, Narvskaya OV, Lapidus AL, O'Brien SJ. Chernyaeva EN, et al. Among authors: ischenko ds. BMC Genomics. 2014 Apr 25;15:308. doi: 10.1186/1471-2164-15-308. BMC Genomics. 2014. PMID: 24767249 Free PMC article.
Unusual large-scale chromosomal rearrangements in Mycobacterium tuberculosis Beijing B0/W148 cluster isolates.
Shitikov EA, Bespyatykh JA, Ischenko DS, Alexeev DG, Karpova IY, Kostryukova ES, Isaeva YD, Nosova EY, Mokrousov IV, Vyazovaya AA, Narvskaya OV, Vishnevsky BI, Otten TF, Zhuravlev VIu, Yablonsky PK, Ilina EN, Govorun VM. Shitikov EA, et al. Among authors: ischenko ds. PLoS One. 2014 Jan 8;9(1):e84971. doi: 10.1371/journal.pone.0084971. eCollection 2014. PLoS One. 2014. PMID: 24416324 Free PMC article.
RNA-Seq gene expression profiling of HepG2 cells: the influence of experimental factors and comparison with liver tissue.
Tyakht AV, Ilina EN, Alexeev DG, Ischenko DS, Gorbachev AY, Semashko TA, Larin AK, Selezneva OV, Kostryukova ES, Karalkin PA, Vakhrushev IV, Kurbatov LK, Archakov AI, Govorun VM. Tyakht AV, et al. Among authors: ischenko ds. BMC Genomics. 2014 Dec 15;15(1):1108. doi: 10.1186/1471-2164-15-1108. BMC Genomics. 2014. PMID: 25511409 Free PMC article.
Genetic diversity of Escherichia coli in gut microbiota of patients with Crohn's disease discovered using metagenomic and genomic analyses.
Tyakht AV, Manolov AI, Kanygina AV, Ischenko DS, Kovarsky BA, Popenko AS, Pavlenko AV, Elizarova AV, Rakitina DV, Baikova JP, Ladygina VG, Kostryukova ES, Karpova IY, Semashko TA, Larin AK, Grigoryeva TV, Sinyagina MN, Malanin SY, Shcherbakov PL, Kharitonova AY, Khalif IL, Shapina MV, Maev IV, Andreev DN, Belousova EA, Buzunova YM, Alexeev DG, Govorun VM. Tyakht AV, et al. Among authors: ischenko ds. BMC Genomics. 2018 Dec 27;19(1):968. doi: 10.1186/s12864-018-5306-5. BMC Genomics. 2018. PMID: 30587114 Free PMC article.
Comparative genomic analysis of Mycobacterium tuberculosis drug resistant strains from Russia.
Ilina EN, Shitikov EA, Ikryannikova LN, Alekseev DG, Kamashev DE, Malakhova MV, Parfenova TV, Afanas'ev MV, Ischenko DS, Bazaleev NA, Smirnova TG, Larionova EE, Chernousova LN, Beletsky AV, Mardanov AV, Ravin NV, Skryabin KG, Govorun VM. Ilina EN, et al. Among authors: ischenko ds. PLoS One. 2013;8(2):e56577. doi: 10.1371/journal.pone.0056577. Epub 2013 Feb 20. PLoS One. 2013. PMID: 23437175 Free PMC article.
Large scale analysis of amino acid substitutions in bacterial proteomics.
Ischenko D, Alexeev D, Shitikov E, Kanygina A, Malakhova M, Kostryukova E, Larin A, Kovalchuk S, Pobeguts O, Butenko I, Anikanov N, Altukhov I, Ilina E, Govorun V. Ischenko D, et al. BMC Bioinformatics. 2016 Nov 8;17(1):450. doi: 10.1186/s12859-016-1301-5. BMC Bioinformatics. 2016. PMID: 27821049 Free PMC article.
The mystery of the fourth clone: comparative genomic analysis of four non-typeable Streptococcus pneumoniae strains with different susceptibilities to optochin.
Ikryannikova LN, Ischenko DS, Lominadze GG, Kanygina AV, Karpova IY, Kostryukova ES, Mayansky NA, Skvortsov VS, Ilina EN, Govorun VM. Ikryannikova LN, et al. Among authors: ischenko ds. Eur J Clin Microbiol Infect Dis. 2016 Jan;35(1):119-30. doi: 10.1007/s10096-015-2516-5. Epub 2015 Nov 12. Eur J Clin Microbiol Infect Dis. 2016. PMID: 26563895
[Metagenomic analysis of taxonomic and functional changes in gut microbiota of patients with alcoholic dependence syndrome].
Dubinkina VB, Tyakht AV, Ilina EN, Ischenko DS, Kovarsky BA, Yarygin KS, Pavlenko AV, Popenko AS, Alexeev DG, Taraskina AE, Nasyrova RF, Krupitski EM, Skorodumova LO, Larin AK, Kostryukova ES, Govorun VM. Dubinkina VB, et al. Among authors: ischenko ds. Biomed Khim. 2015 Nov-Dec;61(6):742-9. doi: 10.18097/PBMC20156106742. Biomed Khim. 2015. PMID: 26716747 Russian.
Data on gut metagenomes of the patients with alcoholic dependence syndrome and alcoholic liver cirrhosis.
Tyakht AV, Dubinkina VB, Odintsova VY, Yarygin KS, Kovarsky BA, Pavlenko AV, Ischenko DS, Popenko AS, Alexeev DG, Taraskina AY, Nasyrova RF, Krupitski EM, Shalikiani NV, Bakulin IG, Shcherbakov PL, Skorodumova LO, Larin AK, Kostryukova ES, Abdulkhakov RA, Abdulkhakov SR, Malanin SY, Ismagilova RK, Grigoryeva TV, Ilina EN, Govorun VM. Tyakht AV, et al. Among authors: ischenko ds. Data Brief. 2017 Jan 17;11:98-102. doi: 10.1016/j.dib.2017.01.008. eCollection 2017 Apr. Data Brief. 2017. PMID: 28138508 Free PMC article.
19 results