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The phylodynamics of SARS-CoV-2 during 2020 in Finland.
Truong Nguyen P, Kant R, Van den Broeck F, Suvanto MT, Alburkat H, Virtanen J, Ahvenainen E, Castren R, Hong SL, Baele G, Ahava MJ, Jarva H, Jokiranta ST, Kallio-Kokko H, Kekäläinen E, Kirjavainen V, Kortela E, Kurkela S, Lappalainen M, Liimatainen H, Suchard MA, Hannula S, Ellonen P, Sironen T, Lemey P, Vapalahti O, Smura T. Truong Nguyen P, et al. Among authors: hannula s. Commun Med (Lond). 2022 Jun 10;2:65. doi: 10.1038/s43856-022-00130-7. eCollection 2022. Commun Med (Lond). 2022. PMID: 35698660 Free PMC article.
Incidence Trends for SARS-CoV-2 Alpha and Beta Variants, Finland, Spring 2021.
Kant R, Nguyen PT, Blomqvist S, Erdin M, Alburkat H, Suvanto M, Zakham F, Salminen V, Olander V, Paloniemi M, Huhti L, Lehtinen S, Luukinen B, Jarva H, Kallio-Kokko H, Kurkela S, Lappalainen M, Liimatainen H, Hannula S, Halkilahti J, Ikonen J, Ikonen N, Helve O, Gunell M, Vuorinen T, Plyusnin I, Lindh E, Ellonen P, Sironen T, Savolainen-Kopra C, Smura T, Vapalahti O. Kant R, et al. Among authors: hannula s. Emerg Infect Dis. 2021 Dec;27(12):3137-3141. doi: 10.3201/eid2712.211631. Epub 2021 Oct 28. Emerg Infect Dis. 2021. PMID: 34708686 Free PMC article.
Introduction and Rapid Spread of SARS-CoV-2 Omicron Variant and Dynamics of BA.1 and BA.1.1 Sublineages, Finland, December 2021.
Vauhkonen H, Nguyen PT, Kant R, Plyusnin I, Erdin M, Kurkela S, Liimatainen H, Ikonen N, Blomqvist S, Liitsola K, Lindh E, Helve O, Jarva H, Loginov R, Palva A, Hannunen T, Hannula S, Parry M, Kauppi P, Vaheri A, Sironen T, Lappalainen M, Savolainen-Kopra C, Smura T, Vapalahti O. Vauhkonen H, et al. Among authors: hannula s. Emerg Infect Dis. 2022 Jun;28(6):1229-1232. doi: 10.3201/eid2806.220515. Epub 2022 Apr 4. Emerg Infect Dis. 2022. PMID: 35378057 Free PMC article.
Geographical and temporal distribution of SARS-CoV-2 clades in the WHO European Region, January to June 2020.
Alm E, Broberg EK, Connor T, Hodcroft EB, Komissarov AB, Maurer-Stroh S, Melidou A, Neher RA, O'Toole Á, Pereyaslov D; WHO European Region sequencing laboratories and GISAID EpiCoV group; WHO European Region sequencing laboratories and GISAID EpiCoV group*. Alm E, et al. Euro Surveill. 2020 Aug;25(32):2001410. doi: 10.2807/1560-7917.ES.2020.25.32.2001410. Euro Surveill. 2020. PMID: 32794443 Free PMC article.
Somatic mTOR mutation in clonally expanded T lymphocytes associated with chronic graft versus host disease.
Kim D, Park G, Huuhtanen J, Lundgren S, Khajuria RK, Hurtado AM, Muñoz-Calleja C, Cardeñoso L, Gómez-García de Soria V, Chen-Liang TH, Eldfors S, Ellonen P, Hannula S, Kankainen M, Bruck O, Kreutzman A, Salmenniemi U, Lönnberg T, Jerez A, Itälä-Remes M, Myllymäki M, Keränen MAI, Mustjoki S. Kim D, et al. Among authors: hannula s. Nat Commun. 2020 May 7;11(1):2246. doi: 10.1038/s41467-020-16115-w. Nat Commun. 2020. PMID: 32382059 Free PMC article.
Comparison of targeted next-generation sequencing (NGS) and real-time PCR in the detection of EGFR, KRAS, and BRAF mutations on formalin-fixed, paraffin-embedded tumor material of non-small cell lung carcinoma-superiority of NGS.
Tuononen K, Mäki-Nevala S, Sarhadi VK, Wirtanen A, Rönty M, Salmenkivi K, Andrews JM, Telaranta-Keerie AI, Hannula S, Lagström S, Ellonen P, Knuuttila A, Knuutila S. Tuononen K, et al. Among authors: hannula s. Genes Chromosomes Cancer. 2013 May;52(5):503-11. doi: 10.1002/gcc.22047. Epub 2013 Jan 30. Genes Chromosomes Cancer. 2013. PMID: 23362162
Comparison of solution-based exome capture methods for next generation sequencing.
Sulonen AM, Ellonen P, Almusa H, Lepistö M, Eldfors S, Hannula S, Miettinen T, Tyynismaa H, Salo P, Heckman C, Joensuu H, Raivio T, Suomalainen A, Saarela J. Sulonen AM, et al. Among authors: hannula s. Genome Biol. 2011 Sep 28;12(9):R94. doi: 10.1186/gb-2011-12-9-r94. Genome Biol. 2011. PMID: 21955854 Free PMC article.
Somatic mutations in lymphocytes in patients with immune-mediated aplastic anemia.
Lundgren S, Keränen MAI, Kankainen M, Huuhtanen J, Walldin G, Kerr CM, Clemente M, Ebeling F, Rajala H, Brück O, Lähdesmäki H, Hannula S, Hannunen T, Ellonen P, Young NS, Ogawa S, Maciejewski JP, Hellström-Lindberg E, Mustjoki S. Lundgren S, et al. Among authors: hannula s. Leukemia. 2021 May;35(5):1365-1379. doi: 10.1038/s41375-021-01231-3. Epub 2021 Mar 30. Leukemia. 2021. PMID: 33785863 Free PMC article.
Thaumatin-like protein and baker's respiratory allergy.
Lehto M, Airaksinen L, Puustinen A, Tillander S, Hannula S, Nyman T, Toskala E, Alenius H, Lauerma A. Lehto M, et al. Among authors: hannula s. Ann Allergy Asthma Immunol. 2010 Feb;104(2):139-46. doi: 10.1016/j.anai.2009.11.062. Ann Allergy Asthma Immunol. 2010. PMID: 20306817
Microbial regulation of feedbacks to ecosystem change.
Ranheim Sveen T, Hannula SE, Bahram M. Ranheim Sveen T, et al. Among authors: hannula se. Trends Microbiol. 2024 Jan;32(1):68-78. doi: 10.1016/j.tim.2023.06.006. Epub 2023 Jul 25. Trends Microbiol. 2024. PMID: 37500365 Free article. Review.
78 results