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In silico design of ligand triggered RNA switches.
Findeiß S, Hammer S, Wolfinger MT, Kühnl F, Flamm C, Hofacker IL. Findeiß S, et al. Among authors: flamm c. Methods. 2018 Jul 1;143:90-101. doi: 10.1016/j.ymeth.2018.04.003. Epub 2018 Apr 13. Methods. 2018. PMID: 29660485
RNA folding at elementary step resolution.
Flamm C, Fontana W, Hofacker IL, Schuster P. Flamm C, et al. RNA. 2000 Mar;6(3):325-38. doi: 10.1017/s1355838200992161. RNA. 2000. PMID: 10744018 Free PMC article.
Design of multistable RNA molecules.
Flamm C, Hofacker IL, Maurer-Stroh S, Stadler PF, Zehl M. Flamm C, et al. RNA. 2001 Feb;7(2):254-65. doi: 10.1017/s1355838201000863. RNA. 2001. PMID: 11233982 Free PMC article.
The expansion of the metazoan microRNA repertoire.
Hertel J, Lindemeyer M, Missal K, Fried C, Tanzer A, Flamm C, Hofacker IL, Stadler PF; Students of Bioinformatics Computer Labs 2004 and 2005. Hertel J, et al. Among authors: flamm c. BMC Genomics. 2006 Feb 15;7:25. doi: 10.1186/1471-2164-7-25. BMC Genomics. 2006. PMID: 16480513 Free PMC article.
Structural parameters affecting the kinetics of RNA hairpin formation.
Nagel JH, Flamm C, Hofacker IL, Franke K, de Smit MH, Schuster P, Pleij CW. Nagel JH, et al. Among authors: flamm c. Nucleic Acids Res. 2006 Jul 19;34(12):3568-76. doi: 10.1093/nar/gkl445. Print 2006. Nucleic Acids Res. 2006. PMID: 16855293 Free PMC article.
Visualization of barrier tree sequences.
Heine C, Scheuermann G, Flamm C, Hofacker IL, Stadler PF. Heine C, et al. Among authors: flamm c. IEEE Trans Vis Comput Graph. 2006 Sep-Oct;12(5):781-8. doi: 10.1109/TVCG.2006.196. IEEE Trans Vis Comput Graph. 2006. PMID: 17080800
RNAs everywhere: genome-wide annotation of structured RNAs.
Athanasius F Bompfünewerer Consortium; Backofen R, Bernhart SH, Flamm C, Fried C, Fritzsch G, Hackermüller J, Hertel J, Hofacker IL, Missal K, Mosig A, Prohaska SJ, Rose D, Stadler PF, Tanzer A, Washietl S, Will S. Athanasius F Bompfünewerer Consortium, et al. Among authors: flamm c. J Exp Zool B Mol Dev Evol. 2007 Jan 15;308(1):1-25. doi: 10.1002/jez.b.21130. J Exp Zool B Mol Dev Evol. 2007. PMID: 17171697 Review.
91 results