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iHOP web services.
Fernández JM, Hoffmann R, Valencia A. Fernández JM, et al. Nucleic Acids Res. 2007 Jul;35(Web Server issue):W21-6. doi: 10.1093/nar/gkm298. Epub 2007 May 7. Nucleic Acids Res. 2007. PMID: 17485473 Free PMC article.
The BLUEPRINT Data Analysis Portal.
Fernández JM, de la Torre V, Richardson D, Royo R, Puiggròs M, Moncunill V, Fragkogianni S, Clarke L; BLUEPRINT Consortium; Flicek P, Rico D, Torrents D, Carrillo de Santa Pau E, Valencia A. Fernández JM, et al. Cell Syst. 2016 Nov 23;3(5):491-495.e5. doi: 10.1016/j.cels.2016.10.021. Epub 2016 Nov 15. Cell Syst. 2016. PMID: 27863955 Free PMC article.
The eTRANSAFE Project on Translational Safety Assessment through Integrative Knowledge Management: Achievements and Perspectives.
Pognan F, Steger-Hartmann T, Díaz C, Blomberg N, Bringezu F, Briggs K, Callegaro G, Capella-Gutierrez S, Centeno E, Corvi J, Drew P, Drewe WC, Fernández JM, Furlong LI, Guney E, Kors JA, Mayer MA, Pastor M, Piñero J, Ramírez-Anguita JM, Ronzano F, Rowell P, Saüch-Pitarch J, Valencia A, van de Water B, van der Lei J, van Mulligen E, Sanz F. Pognan F, et al. Among authors: fernandez jm. Pharmaceuticals (Basel). 2021 Mar 8;14(3):237. doi: 10.3390/ph14030237. Pharmaceuticals (Basel). 2021. PMID: 33800393 Free PMC article.
Recommendations for the FAIRification of genomic track metadata.
Gundersen S, Boddu S, Capella-Gutierrez S, Drabløs F, Fernández JM, Kompova R, Taylor K, Titov D, Zerbino D, Hovig E. Gundersen S, et al. Among authors: fernandez jm. F1000Res. 2021 Apr 1;10:ELIXIR-268. doi: 10.12688/f1000research.28449.1. eCollection 2021. F1000Res. 2021. PMID: 34249331 Free PMC article.
DOME: recommendations for supervised machine learning validation in biology.
Walsh I, Fishman D, Garcia-Gasulla D, Titma T, Pollastri G; ELIXIR Machine Learning Focus Group; Harrow J, Psomopoulos FE, Tosatto SCE. Walsh I, et al. Nat Methods. 2021 Oct;18(10):1122-1127. doi: 10.1038/s41592-021-01205-4. Nat Methods. 2021. PMID: 34316068 Free article. No abstract available.
971 results