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Designer protein assemblies with tunable phase diagrams in living cells.
Heidenreich M, Georgeson JM, Locatelli E, Rovigatti L, Nandi SK, Steinberg A, Nadav Y, Shimoni E, Safran SA, Doye JPK, Levy ED. Heidenreich M, et al. Among authors: doye jpk. Nat Chem Biol. 2020 Sep;16(9):939-945. doi: 10.1038/s41589-020-0576-z. Epub 2020 Jul 13. Nat Chem Biol. 2020. PMID: 32661377
Self-assembly and evolution of homomeric protein complexes.
Villar G, Wilber AW, Williamson AJ, Thiara P, Doye JP, Louis AA, Jochum MN, Lewis AC, Levy ED. Villar G, et al. Phys Rev Lett. 2009 Mar 20;102(11):118106. doi: 10.1103/PhysRevLett.102.118106. Epub 2009 Mar 18. Phys Rev Lett. 2009. PMID: 19392244
Coarse-graining DNA for simulations of DNA nanotechnology.
Doye JP, Ouldridge TE, Louis AA, Romano F, Šulc P, Matek C, Snodin BE, Rovigatti L, Schreck JS, Harrison RM, Smith WP. Doye JP, et al. Phys Chem Chem Phys. 2013 Dec 21;15(47):20395-414. doi: 10.1039/c3cp53545b. Epub 2013 Oct 11. Phys Chem Chem Phys. 2013. PMID: 24121860 Free article.
Direct Simulation of the Self-Assembly of a Small DNA Origami.
Snodin BE, Romano F, Rovigatti L, Ouldridge TE, Louis AA, Doye JP. Snodin BE, et al. ACS Nano. 2016 Feb 23;10(2):1724-37. doi: 10.1021/acsnano.5b05865. Epub 2016 Jan 22. ACS Nano. 2016. PMID: 26766072 Free article.
Force-Induced Unravelling of DNA Origami.
Engel MC, Smith DM, Jobst MA, Sajfutdinow M, Liedl T, Romano F, Rovigatti L, Louis AA, Doye JPK. Engel MC, et al. Among authors: doye jpk. ACS Nano. 2018 Jul 24;12(7):6734-6747. doi: 10.1021/acsnano.8b01844. Epub 2018 Jun 18. ACS Nano. 2018. PMID: 29851456
The oxDNA Coarse-Grained Model as a Tool to Simulate DNA Origami.
Doye JPK, Fowler H, Prešern D, Bohlin J, Rovigatti L, Romano F, Šulc P, Wong CK, Louis AA, Schreck JS, Engel MC, Matthies M, Benson E, Poppleton E, Snodin BEK. Doye JPK, et al. Methods Mol Biol. 2023;2639:93-112. doi: 10.1007/978-1-0716-3028-0_6. Methods Mol Biol. 2023. PMID: 37166713
94 results