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Spindle Checkpoint Factors Bub1 and Bub2 Promote DNA Double-Strand Break Repair by Nonhomologous End Joining.
Jessulat M, Malty RH, Nguyen-Tran DH, Deineko V, Aoki H, Vlasblom J, Omidi K, Jin K, Minic Z, Hooshyar M, Burnside D, Samanfar B, Phanse S, Freywald T, Prasad B, Zhang Z, Vizeacoumar F, Krogan NJ, Freywald A, Golshani A, Babu M. Jessulat M, et al. Among authors: burnside d. Mol Cell Biol. 2015 Jul;35(14):2448-63. doi: 10.1128/MCB.00007-15. Epub 2015 May 11. Mol Cell Biol. 2015. PMID: 25963654 Free PMC article.
The conserved Tpk1 regulates non-homologous end joining double-strand break repair by phosphorylation of Nej1, a homolog of the human XLF.
Jessulat M, Amin S, Hooshyar M, Malty R, Moutaoufik MT, Zilocchi M, Istace Z, Phanse S, Aoki H, Omidi K, Burnside D, Samanfar B, Aly KA, Golshani A, Babu M. Jessulat M, et al. Among authors: burnside d. Nucleic Acids Res. 2021 Aug 20;49(14):8145-8160. doi: 10.1093/nar/gkab585. Nucleic Acids Res. 2021. PMID: 34244791 Free PMC article.
A global investigation of gene deletion strains that affect premature stop codon bypass in yeast, Saccharomyces cerevisiae.
Samanfar B, Tan le H, Shostak K, Chalabian F, Wu Z, Alamgir M, Sunba N, Burnside D, Omidi K, Hooshyar M, Galván Márquez I, Jessulat M, Smith ML, Babu M, Azizi A, Golshani A. Samanfar B, et al. Among authors: burnside d. Mol Biosyst. 2014 Apr;10(4):916-24. doi: 10.1039/c3mb70501c. Epub 2014 Feb 18. Mol Biosyst. 2014. PMID: 24535059
Evolution of protein-protein interaction networks in yeast.
Schoenrock A, Burnside D, Moteshareie H, Pitre S, Hooshyar M, Green JR, Golshani A, Dehne F, Wong A. Schoenrock A, et al. Among authors: burnside d. PLoS One. 2017 Mar 1;12(3):e0171920. doi: 10.1371/journal.pone.0171920. eCollection 2017. PLoS One. 2017. PMID: 28248977 Free PMC article.
Heavy metal sensitivities of gene deletion strains for ITT1 and RPS1A connect their activities to the expression of URE2, a key gene involved in metal detoxification in yeast.
Moteshareie H, Hajikarimlou M, Mulet Indrayanti A, Burnside D, Paula Dias A, Lettl C, Ahmed D, Omidi K, Kazmirchuk T, Puchacz N, Zare N, Takallou S, Naing T, Hernández RB, Willmore WG, Babu M, McKay B, Samanfar B, Holcik M, Golshani A. Moteshareie H, et al. Among authors: burnside d. PLoS One. 2018 Sep 19;13(9):e0198704. doi: 10.1371/journal.pone.0198704. eCollection 2018. PLoS One. 2018. PMID: 30231023 Free PMC article.
Sensitivity of yeast to lithium chloride connects the activity of YTA6 and YPR096C to translation of structured mRNAs.
Hajikarimlou M, Moteshareie H, Omidi K, Hooshyar M, Shaikho S, Kazmirchuk T, Burnside D, Takallou S, Zare N, Jagadeesan SK, Puchacz N, Babu M, Smith M, Holcik M, Samanfar B, Golshani A. Hajikarimlou M, et al. Among authors: burnside d. PLoS One. 2020 Jul 8;15(7):e0235033. doi: 10.1371/journal.pone.0235033. eCollection 2020. PLoS One. 2020. PMID: 32639961 Free PMC article.
Discovery and identification of genes involved in DNA damage repair in yeast.
Jagadeesan SK, Potter T, Al-Gafari M, Hooshyar M, Hewapathirana CM, Takallou S, Hajikarimlou M, Burnside D, Samanfar B, Moteshareie H, Smith M, Golshani A. Jagadeesan SK, et al. Among authors: burnside d. Gene. 2022 Jul 15;831:146549. doi: 10.1016/j.gene.2022.146549. Epub 2022 May 13. Gene. 2022. PMID: 35569766
40 results