Bojarski AJ - Search Results

1

Ligand-Based Virtual Screening in a Search for Novel Anti-HIV-1 Chemotypes.

Kurczyk A, Warszycki D, Musiol R, Kafel R, Bojarski AJ, Polanski J. Kurczyk A, et al. Among authors: bojarski aj. J Chem Inf Model. 2015 Oct 26;55(10):2168-77. doi: 10.1021/acs.jcim.5b00295. Epub 2015 Oct 9. J Chem Inf Model. 2015. PMID: 26431196

2

The development and validation of a novel virtual screening cascade protocol to identify potential serotonin 5-HT(7)R antagonists.

Kurczab R, Nowak M, Chilmonczyk Z, Sylte I, Bojarski AJ. Kurczab R, et al. Among authors: bojarski aj. Bioorg Med Chem Lett. 2010 Apr 15;20(8):2465-8. doi: 10.1016/j.bmcl.2010.03.012. Epub 2010 Mar 6. Bioorg Med Chem Lett. 2010. PMID: 20346662

3

New strategy for receptor-based pharmacophore query construction: a case study for 5-HT₇ receptor ligands.

Kurczab R, Bojarski AJ. Kurczab R, et al. Among authors: bojarski aj. J Chem Inf Model. 2013 Dec 23;53(12):3233-43. doi: 10.1021/ci4005207. Epub 2013 Nov 22. J Chem Inf Model. 2013. PMID: 24245803

4

A linear combination of pharmacophore hypotheses as a new tool in search of new active compounds--an application for 5-HT1A receptor ligands.

Warszycki D, Mordalski S, Kristiansen K, Kafel R, Sylte I, Chilmonczyk Z, Bojarski AJ. Warszycki D, et al. Among authors: bojarski aj. PLoS One. 2013 Dec 18;8(12):e84510. doi: 10.1371/journal.pone.0084510. eCollection 2013. PLoS One. 2013. PMID: 24367669 Free PMC article.

5

Identification of novel serotonin transporter compounds by virtual screening.

Gabrielsen M, Kurczab R, Siwek A, Wolak M, Ravna AW, Kristiansen K, Kufareva I, Abagyan R, Nowak G, Chilmonczyk Z, Sylte I, Bojarski AJ. Gabrielsen M, et al. Among authors: bojarski aj. J Chem Inf Model. 2014 Mar 24;54(3):933-43. doi: 10.1021/ci400742s. Epub 2014 Feb 26. J Chem Inf Model. 2014. PMID: 24521202 Free PMC article.

6

Impact of template choice on homology model efficiency in virtual screening.

Rataj K, Witek J, Mordalski S, Kosciolek T, Bojarski AJ. Rataj K, et al. Among authors: bojarski aj. J Chem Inf Model. 2014 Jun 23;54(6):1661-8. doi: 10.1021/ci500001f. Epub 2014 May 21. J Chem Inf Model. 2014. PMID: 24813470

7

Asymmetric clustering index in a case study of 5-HT1A receptor ligands.

Śmieja M, Warszycki D, Tabor J, Bojarski AJ. Śmieja M, et al. Among authors: bojarski aj. PLoS One. 2014 Jul 14;9(7):e102069. doi: 10.1371/journal.pone.0102069. eCollection 2014. PLoS One. 2014. PMID: 25019251 Free PMC article.

8

Exploiting uncertainty measures in compounds activity prediction using support vector machines.

Smusz S, Czarnecki WM, Warszycki D, Bojarski AJ. Smusz S, et al. Among authors: bojarski aj. Bioorg Med Chem Lett. 2015 Jan 1;25(1):100-5. doi: 10.1016/j.bmcl.2014.11.005. Epub 2014 Nov 7. Bioorg Med Chem Lett. 2015. PMID: 25466199

9

Bioisosteric matrices for ligands of serotonin receptors.

Warszycki D, Mordalski S, Staroń J, Bojarski AJ. Warszycki D, et al. Among authors: bojarski aj. ChemMedChem. 2015 Apr;10(4):601-5. doi: 10.1002/cmdc.201402563. Epub 2015 Mar 13. ChemMedChem. 2015. PMID: 25772514 Free PMC article.

10

Multi-Step Protocol for Automatic Evaluation of Docking Results Based on Machine Learning Methods--A Case Study of Serotonin Receptors 5-HT(6) and 5-HT(7).

Smusz S, Mordalski S, Witek J, Rataj K, Kafel R, Bojarski AJ. Smusz S, et al. Among authors: bojarski aj. J Chem Inf Model. 2015 Apr 27;55(4):823-32. doi: 10.1021/ci500564b. Epub 2015 Apr 8. J Chem Inf Model. 2015. PMID: 25806997

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