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The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens.
Zhou N, Jiang Y, Bergquist TR, Lee AJ, Kacsoh BZ, Crocker AW, Lewis KA, Georghiou G, Nguyen HN, Hamid MN, Davis L, Dogan T, Atalay V, Rifaioglu AS, Dalkıran A, Cetin Atalay R, Zhang C, Hurto RL, Freddolino PL, Zhang Y, Bhat P, Supek F, Fernández JM, Gemovic B, Perovic VR, Davidović RS, Sumonja N, Veljkovic N, Asgari E, Mofrad MRK, Profiti G, Savojardo C, Martelli PL, Casadio R, Boecker F, Schoof H, Kahanda I, Thurlby N, McHardy AC, Renaux A, Saidi R, Gough J, Freitas AA, Antczak M, Fabris F, Wass MN, Hou J, Cheng J, Wang Z, Romero AE, Paccanaro A, Yang H, Goldberg T, Zhao C, Holm L, Törönen P, Medlar AJ, Zosa E, Borukhov I, Novikov I, Wilkins A, Lichtarge O, Chi PH, Tseng WC, Linial M, Rose PW, Dessimoz C, Vidulin V, Dzeroski S, Sillitoe I, Das S, Lees JG, Jones DT, Wan C, Cozzetto D, Fa R, Torres M, Warwick Vesztrocy A, Rodriguez JM, Tress ML, Frasca M, Notaro M, Grossi G, Petrini A, Re M, Valentini G, Mesiti M, Roche DB, Reeb J, Ritchie DW, Aridhi S, Alborzi SZ, Devignes MD, Koo DCE, Bonneau R, Gligorijević V, Barot M, Fang H, Toppo S, Lavezzo E, Falda M, Berselli M, Tosatto SCE, Carraro M, Piovesan D, Ur Rehman H, Mao Q, Zhang S, Vucetic S, Black GS, Jo D, Suh E, Dayton … See abstract for full author list ➔ Zhou N, et al. Among authors: black gs. Genome Biol. 2019 Nov 19;20(1):244. doi: 10.1186/s13059-019-1835-8. Genome Biol. 2019. PMID: 31744546 Free PMC article.
Preterm birth and infant diurnal cortisol regulation.
Stoye DQ, Boardman JP, Osmond C, Sullivan G, Lamb G, Black GS, Homer NZ, Nelson N, Theodorsson E, Reynolds RM, Mörelius E. Stoye DQ, et al. Among authors: black gs. Arch Dis Child Fetal Neonatal Ed. 2022 Sep;107(5):565-567. doi: 10.1136/archdischild-2021-323296. Epub 2022 Mar 14. Arch Dis Child Fetal Neonatal Ed. 2022. PMID: 35288450
Saliva cortisol diurnal variation and stress responses in term and preterm infants.
Stoye DQ, Boardman JP, Osmond C, Sullivan G, Lamb G, Black GS, Homer NZM, Nelson N, Theodorsson E, Mörelius E, Reynolds RM. Stoye DQ, et al. Among authors: black gs. Arch Dis Child Fetal Neonatal Ed. 2022 Sep;107(5):558-564. doi: 10.1136/archdischild-2021-321593. Epub 2022 Mar 7. Arch Dis Child Fetal Neonatal Ed. 2022. PMID: 35256524 Free PMC article.
Perinatal determinants of neonatal hair glucocorticoid concentrations.
Stoye DQ, Sullivan G, Galdi P, Kirschbaum C, Lamb GJ, Black GS, Evans MJ, Boardman JP, Reynolds RM. Stoye DQ, et al. Among authors: black gs. Psychoneuroendocrinology. 2021 Jun;128:105223. doi: 10.1016/j.psyneuen.2021.105223. Epub 2021 Apr 10. Psychoneuroendocrinology. 2021. PMID: 33878601 Free PMC article.
Patient satisfaction surveys and multicollinearity.
Stratmann WC, Zastowny TR, Bayer LR, Adams EH, Black GS, Fry PA. Stratmann WC, et al. Among authors: black gs. Qual Manag Health Care. 1994 Winter;2(2):1-12. Qual Manag Health Care. 1994. PMID: 10133363
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