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Animal snoRNAs and scaRNAs with exceptional structures.
Marz M, Gruber AR, Höner Zu Siederdissen C, Amman F, Badelt S, Bartschat S, Bernhart SH, Beyer W, Kehr S, Lorenz R, Tanzer A, Yusuf D, Tafer H, Hofacker IL, Stadler PF. Marz M, et al. Among authors: bartschat s. RNA Biol. 2011 Nov-Dec;8(6):938-46. doi: 10.4161/rna.8.6.16603. Epub 2011 Nov 1. RNA Biol. 2011. PMID: 21955586 Free PMC article.
PLEXY: efficient target prediction for box C/D snoRNAs.
Kehr S, Bartschat S, Stadler PF, Tafer H. Kehr S, et al. Among authors: bartschat s. Bioinformatics. 2011 Jan 15;27(2):279-80. doi: 10.1093/bioinformatics/btq642. Epub 2010 Nov 13. Bioinformatics. 2011. PMID: 21076148
Evolution of the let-7 microRNA family.
Hertel J, Bartschat S, Wintsche A, Otto C; Students of the Bioinformatics Computer Lab; Stadler PF. Hertel J, et al. Among authors: bartschat s. RNA Biol. 2012 Mar;9(3):231-41. doi: 10.4161/rna.18974. Epub 2012 Mar 1. RNA Biol. 2012. PMID: 22617875 Free PMC article.
snoStrip: a snoRNA annotation pipeline.
Bartschat S, Kehr S, Tafer H, Stadler PF, Hertel J. Bartschat S, et al. Bioinformatics. 2014 Jan 1;30(1):115-6. doi: 10.1093/bioinformatics/btt604. Epub 2013 Oct 29. Bioinformatics. 2014. PMID: 24174566
Structured RNAs and synteny regions in the pig genome.
Anthon C, Tafer H, Havgaard JH, Thomsen B, Hedegaard J, Seemann SE, Pundhir S, Kehr S, Bartschat S, Nielsen M, Nielsen RO, Fredholm M, Stadler PF, Gorodkin J. Anthon C, et al. Among authors: bartschat s. BMC Genomics. 2014 Jun 10;15(1):459. doi: 10.1186/1471-2164-15-459. BMC Genomics. 2014. PMID: 24917120 Free PMC article.
The duck genome and transcriptome provide insight into an avian influenza virus reservoir species.
Huang Y, Li Y, Burt DW, Chen H, Zhang Y, Qian W, Kim H, Gan S, Zhao Y, Li J, Yi K, Feng H, Zhu P, Li B, Liu Q, Fairley S, Magor KE, Du Z, Hu X, Goodman L, Tafer H, Vignal A, Lee T, Kim KW, Sheng Z, An Y, Searle S, Herrero J, Groenen MAM, Crooijmans RPMA, Faraut T, Cai Q, Webster RG, Aldridge JR, Warren WC, Bartschat S, Kehr S, Marz M, Stadler PF, Smith J, Kraus RHS, Zhao Y, Ren L, Fei J, Morisson M, Kaiser P, Griffin DK, Rao M, Pitel F, Wang J, Li N. Huang Y, et al. Among authors: bartschat s. Nat Genet. 2013 Jul;45(7):776-783. doi: 10.1038/ng.2657. Epub 2013 Jun 9. Nat Genet. 2013. PMID: 23749191 Free PMC article.
Long-term outcome in a case of shaken baby syndrome.
Bartschat S, Richter C, Stiller D, Banschak S. Bartschat S, et al. Med Sci Law. 2016 Apr;56(2):147-9. doi: 10.1177/0025802415581442. Epub 2015 Jun 8. Med Sci Law. 2016. PMID: 26055154
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