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VDJdb in 2019: database extension, new analysis infrastructure and a T-cell receptor motif compendium.
Bagaev DV, Vroomans RMA, Samir J, Stervbo U, Rius C, Dolton G, Greenshields-Watson A, Attaf M, Egorov ES, Zvyagin IV, Babel N, Cole DK, Godkin AJ, Sewell AK, Kesmir C, Chudakov DM, Luciani F, Shugay M. Bagaev DV, et al. Among authors: babel n. Nucleic Acids Res. 2020 Jan 8;48(D1):D1057-D1062. doi: 10.1093/nar/gkz874. Nucleic Acids Res. 2020. PMID: 31588507 Free PMC article.
TCR repertoire analysis by next generation sequencing allows complex differential diagnosis of T cell-related pathology.
Dziubianau M, Hecht J, Kuchenbecker L, Sattler A, Stervbo U, Rödelsperger C, Nickel P, Neumann AU, Robinson PN, Mundlos S, Volk HD, Thiel A, Reinke P, Babel N. Dziubianau M, et al. Among authors: babel n. Am J Transplant. 2013 Nov;13(11):2842-54. doi: 10.1111/ajt.12431. Epub 2013 Sep 10. Am J Transplant. 2013. PMID: 24020931 Free article.
IMSEQ--a fast and error aware approach to immunogenetic sequence analysis.
Kuchenbecker L, Nienen M, Hecht J, Neumann AU, Babel N, Reinert K, Robinson PN. Kuchenbecker L, et al. Among authors: babel n. Bioinformatics. 2015 Sep 15;31(18):2963-71. doi: 10.1093/bioinformatics/btv309. Epub 2015 May 18. Bioinformatics. 2015. PMID: 25987567
Differential T cell response against BK virus regulatory and structural antigens: A viral dynamics modelling approach.
Blazquez-Navarro A, Schachtner T, Stervbo U, Sefrin A, Stein M, Westhoff TH, Reinke P, Klipp E, Babel N, Neumann AU, Or-Guil M. Blazquez-Navarro A, et al. Among authors: babel n. PLoS Comput Biol. 2018 May 10;14(5):e1005998. doi: 10.1371/journal.pcbi.1005998. eCollection 2018 May. PLoS Comput Biol. 2018. PMID: 29746472 Free PMC article.
The Effect of Microgravity on Central Aortic Blood Pressure.
Seibert FS, Bernhard F, Stervbo U, Vairavanathan S, Bauer F, Rohn B, Pagonas N, Babel N, Jankowski J, Westhoff TH. Seibert FS, et al. Among authors: babel n. Am J Hypertens. 2018 Oct 15;31(11):1183-1189. doi: 10.1093/ajh/hpy119. Am J Hypertens. 2018. PMID: 30052726
Gravitational stress during parabolic flights reduces the number of circulating innate and adaptive leukocyte subsets in human blood.
Stervbo U, Roch T, Kornprobst T, Sawitzki B, Grütz G, Wilhelm A, Lacombe F, Allou K, Kaymer M, Pacheco A, Vigne J, Westhoff TH, Seibert FS, Babel N. Stervbo U, et al. Among authors: babel n. PLoS One. 2018 Nov 14;13(11):e0206272. doi: 10.1371/journal.pone.0206272. eCollection 2018. PLoS One. 2018. PMID: 30427865 Free PMC article.
232 results