Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation

Search Page

Filters

My NCBI Filters

Text availability

Article attribute

Article type

Publication date

Search Results

51 results

Filters applied: . Clear all
Results are displayed in a computed author sort order. The Results By Year timeline is not available.
Page 1
Animal snoRNAs and scaRNAs with exceptional structures.
Marz M, Gruber AR, Höner Zu Siederdissen C, Amman F, Badelt S, Bartschat S, Bernhart SH, Beyer W, Kehr S, Lorenz R, Tanzer A, Yusuf D, Tafer H, Hofacker IL, Stadler PF. Marz M, et al. Among authors: amman f. RNA Biol. 2011 Nov-Dec;8(6):938-46. doi: 10.4161/rna.8.6.16603. Epub 2011 Nov 1. RNA Biol. 2011. PMID: 21955586 Free PMC article.
Fast accessibility-based prediction of RNA-RNA interactions.
Tafer H, Amman F, Eggenhofer F, Stadler PF, Hofacker IL. Tafer H, et al. Among authors: amman f. Bioinformatics. 2011 Jul 15;27(14):1934-40. doi: 10.1093/bioinformatics/btr281. Epub 2011 May 18. Bioinformatics. 2011. PMID: 21593134
2D meets 4G: G-quadruplexes in RNA secondary structure prediction.
Lorenz R, Bernhart SH, Qin J, Höner zu Siederdissen C, Tanzer A, Amman F, Hofacker IL, Stadler PF. Lorenz R, et al. Among authors: amman f. IEEE/ACM Trans Comput Biol Bioinform. 2013 Jul-Aug;10(4):832-44. doi: 10.1109/TCBB.2013.7. IEEE/ACM Trans Comput Biol Bioinform. 2013. PMID: 24334379
TSSAR: TSS annotation regime for dRNA-seq data.
Amman F, Wolfinger MT, Lorenz R, Hofacker IL, Stadler PF, Findeiß S. Amman F, et al. BMC Bioinformatics. 2014 Mar 27;15:89. doi: 10.1186/1471-2105-15-89. BMC Bioinformatics. 2014. PMID: 24674136 Free PMC article.
Bioinformatics of prokaryotic RNAs.
Backofen R, Amman F, Costa F, Findeiß S, Richter AS, Stadler PF. Backofen R, et al. Among authors: amman f. RNA Biol. 2014;11(5):470-83. doi: 10.4161/rna.28647. Epub 2014 Apr 2. RNA Biol. 2014. PMID: 24755880 Free PMC article. Review.
Differential transcriptional responses to Ebola and Marburg virus infection in bat and human cells.
Hölzer M, Krähling V, Amman F, Barth E, Bernhart SH, Carmelo VA, Collatz M, Doose G, Eggenhofer F, Ewald J, Fallmann J, Feldhahn LM, Fricke M, Gebauer J, Gruber AJ, Hufsky F, Indrischek H, Kanton S, Linde J, Mostajo N, Ochsenreiter R, Riege K, Rivarola-Duarte L, Sahyoun AH, Saunders SJ, Seemann SE, Tanzer A, Vogel B, Wehner S, Wolfinger MT, Backofen R, Gorodkin J, Grosse I, Hofacker I, Hoffmann S, Kaleta C, Stadler PF, Becker S, Marz M. Hölzer M, et al. Among authors: amman f. Sci Rep. 2016 Oct 7;6:34589. doi: 10.1038/srep34589. Sci Rep. 2016. PMID: 27713552 Free PMC article.
Corrigendum: Differential transcriptional responses to Ebola and Marburg virus infection in bat and human cells.
Hölzer M, Krähling V, Amman F, Barth E, Bernhart SH, Carmelo VA, Collatz M, Doose G, Eggenhofer F, Ewald J, Fallmann J, Feldhahn LM, Fricke M, Gebauer J, Gruber AJ, Hufsky F, Indrischek H, Kanton S, Linde J, Mostajo N, Ochsenreiter R, Riege K, Rivarola-Duarte L, Sahyoun AH, Saunders SJ, Seemann SE, Tanzer A, Vogel B, Wehner S, Wolfinger MT, Backofen R, Gorodkin J, Grosse I, Hofacker I, Hoffmann S, Kaleta C, Stadler PF, Becker S, Marz M. Hölzer M, et al. Among authors: amman f. Sci Rep. 2017 Jan 11;7:39421. doi: 10.1038/srep39421. Sci Rep. 2017. PMID: 28074834 Free PMC article. No abstract available.
Accurate mapping of tRNA reads.
Hoffmann A, Fallmann J, Vilardo E, Mörl M, Stadler PF, Amman F. Hoffmann A, et al. Among authors: amman f. Bioinformatics. 2018 Apr 1;34(7):1116-1124. doi: 10.1093/bioinformatics/btx756. Bioinformatics. 2018. PMID: 29228294
MSF: Modulated Sub-graph Finder.
Farman MR, Hofacker IL, Amman F. Farman MR, et al. Among authors: amman f. F1000Res. 2018 Aug 29;7:1346. doi: 10.12688/f1000research.16005.3. eCollection 2018. F1000Res. 2018. PMID: 30984370 Free PMC article.
51 results