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Development of a highly efficient Axiom™ 70 K SNP array for Pyrus and evaluation for high-density mapping and germplasm characterization.
Montanari S, Bianco L, Allen BJ, Martínez-García PJ, Bassil NV, Postman J, Knäbel M, Kitson B, Deng CH, Chagné D, Crepeau MW, Langley CH, Evans K, Dhingra A, Troggio M, Neale DB. Montanari S, et al. Among authors: allen bj. BMC Genomics. 2019 May 2;20(1):331. doi: 10.1186/s12864-019-5712-3. BMC Genomics. 2019. PMID: 31046664 Free PMC article.
High-quality chromosome-scale assembly of the walnut (Juglans regia L.) reference genome.
Marrano A, Britton M, Zaini PA, Zimin AV, Workman RE, Puiu D, Bianco L, Pierro EAD, Allen BJ, Chakraborty S, Troggio M, Leslie CA, Timp W, Dandekar A, Salzberg SL, Neale DB. Marrano A, et al. Among authors: allen bj. Gigascience. 2020 May 1;9(5):giaa050. doi: 10.1093/gigascience/giaa050. Gigascience. 2020. PMID: 32432329 Free PMC article.
Assembled and annotated 26.5 Gbp coast redwood genome: a resource for estimating evolutionary adaptive potential and investigating hexaploid origin.
Neale DB, Zimin AV, Zaman S, Scott AD, Shrestha B, Workman RE, Puiu D, Allen BJ, Moore ZJ, Sekhwal MK, De La Torre AR, McGuire PE, Burns E, Timp W, Wegrzyn JL, Salzberg SL. Neale DB, et al. Among authors: allen bj. G3 (Bethesda). 2022 Jan 4;12(1):jkab380. doi: 10.1093/g3journal/jkab380. G3 (Bethesda). 2022. PMID: 35100403 Free PMC article.
Identification of Putative Markers of Non-infectious Bud Failure in Almond [Prunus dulcis (Mill.) D.A. Webb] Through Genome Wide DNA Methylation Profiling and Gene Expression Analysis in an Almond × Peach Hybrid Population.
D'Amico-Willman KM, Sideli GM, Allen BJ, Anderson ES, Gradziel TM, Fresnedo-Ramírez J. D'Amico-Willman KM, et al. Among authors: allen bj. Front Plant Sci. 2022 Feb 14;13:804145. doi: 10.3389/fpls.2022.804145. eCollection 2022. Front Plant Sci. 2022. PMID: 35237284 Free PMC article.
A genome sequence for the threatened whitebark pine.
Neale DB, Zimin AV, Meltzer A, Bhattarai A, Amee M, Figueroa Corona L, Allen BJ, Puiu D, Wright J, De La Torre AR, McGuire PE, Timp W, Salzberg SL, Wegrzyn JL. Neale DB, et al. Among authors: allen bj. G3 (Bethesda). 2024 May 7;14(5):jkae061. doi: 10.1093/g3journal/jkae061. G3 (Bethesda). 2024. PMID: 38526344 Free PMC article.
A Genome Sequence for the Threatened Whitebark Pine.
Neale DB, Zimin AV, Meltzer A, Bhattarai A, Amee M, Corona LF, Allen BJ, Puiu D, Wright J, Torre AR, McGuire PE, Timp W, Salzberg SL, Wegrzyn JL. Neale DB, et al. Among authors: allen bj. bioRxiv [Preprint]. 2023 Nov 17:2023.11.16.567420. doi: 10.1101/2023.11.16.567420. bioRxiv. 2023. PMID: 38014212 Free PMC article. Updated. Preprint.
261 results