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Metagenomic insights into the impact of litter from poultry Concentrated Animal Feeding Operations (CAFOs) to adjacent soil and water microbial communities.
Sci Total Environ. 2024 Apr 10;920:170772. doi: 10.1016/j.scitotenv.2024.170772. Epub 2024 Feb 10.
Sci Total Environ. 2024.
PMID: 38346660
Toward shotgun metagenomic approaches for microbial source tracking sewage spills based on laboratory mesocosms.
Lindner BG, Suttner B, Zhu KJ, Conrad RE, Rodriguez-R LM, Hatt JK, Brown J, Konstantinidis KT.
Lindner BG, et al.
Water Res. 2022 Feb 15;210:117993. doi: 10.1016/j.watres.2021.117993. Epub 2021 Dec 25.
Water Res. 2022.
PMID: 34979467
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Parallel deployment of passive and composite samplers for surveillance and variant profiling of SARS-CoV-2 in sewage.
Cha G, Graham KE, Zhu KJ, Rao G, Lindner BG, Kocaman K, Woo S, D'amico I, Bingham LR, Fischer JM, Flores CI, Spencer JW, Yathiraj P, Chung H, Biliya S, Djeddar N, Burton LJ, Mascuch SJ, Brown J, Bryksin A, Pinto A, Hatt JK, Konstantinidis KT.
Cha G, et al. Among authors: lindner bg.
Sci Total Environ. 2023 Mar 25;866:161101. doi: 10.1016/j.scitotenv.2022.161101. Epub 2022 Dec 26.
Sci Total Environ. 2023.
PMID: 36581284
Free PMC article.
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Fecal microbiota transplantation promotes reduction of antimicrobial resistance by strain replacement.
Woodworth MH, Conrad RE, Haldopoulos M, Pouch SM, Babiker A, Mehta AK, Sitchenko KL, Wang CH, Strudwick A, Ingersoll JM, Philippe C, Lohsen S, Kocaman K, Lindner BG, Hatt JK, Jones RM, Miller C, Neish AS, Friedman-Moraco R, Karadkhele G, Liu KH, Jones DP, Mehta CC, Ziegler TR, Weiss DS, Larsen CP, Konstantinidis KT, Kraft CS.
Woodworth MH, et al. Among authors: lindner bg.
Sci Transl Med. 2023 Nov;15(720):eabo2750. doi: 10.1126/scitranslmed.abo2750. Epub 2023 Nov 1.
Sci Transl Med. 2023.
PMID: 37910603
Free PMC article.
Clinical Trial.
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A user's guide to the bioinformatic analysis of shotgun metagenomic sequence data for bacterial pathogen detection.
Lindner BG, Gerhardt K, Feistel DJ, Rodriguez-R LM, Hatt JK, Konstantinidis KT.
Lindner BG, et al.
Int J Food Microbiol. 2024 Jan 30;410:110488. doi: 10.1016/j.ijfoodmicro.2023.110488. Epub 2023 Nov 17.
Int J Food Microbiol. 2024.
PMID: 38035404
Review.
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An ANI gap within bacterial species that advances the definitions of intra-species units.
Rodriguez-R LM, Conrad RE, Viver T, Feistel DJ, Lindner BG, Venter SN, Orellana LH, Amann R, Rossello-Mora R, Konstantinidis KT.
Rodriguez-R LM, et al. Among authors: lindner bg.
mBio. 2024 Jan 16;15(1):e0269623. doi: 10.1128/mbio.02696-23. Epub 2023 Dec 12.
mBio. 2024.
PMID: 38085031
Free PMC article.
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Potential routes of plastics biotransformation involving novel plastizymes revealed by global multi-omic analysis of plastic associated microbes.
Ridley RS Jr, Conrad RE, Lindner BG, Woo S, Konstantinidis KT.
Ridley RS Jr, et al. Among authors: lindner bg.
Sci Rep. 2024 Apr 16;14(1):8798. doi: 10.1038/s41598-024-59279-x.
Sci Rep. 2024.
PMID: 38627476
Free PMC article.
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