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Metabolome-guided genome mining of RiPP natural products.
Zdouc MM, van der Hooft JJJ, Medema MH. Zdouc MM, et al. Among authors: van der hooft jjj. Trends Pharmacol Sci. 2023 Aug;44(8):532-541. doi: 10.1016/j.tips.2023.06.004. Epub 2023 Jun 29. Trends Pharmacol Sci. 2023. PMID: 37391295 Review.
Recent advances in mass spectrometry-based computational metabolomics.
Ebbels TMD, van der Hooft JJJ, Chatelaine H, Broeckling C, Zamboni N, Hassoun S, Mathé EA. Ebbels TMD, et al. Among authors: van der hooft jjj. Curr Opin Chem Biol. 2023 Jun;74:102288. doi: 10.1016/j.cbpa.2023.102288. Epub 2023 Mar 24. Curr Opin Chem Biol. 2023. PMID: 36966702 Free PMC article. Review.
MS2Query: reliable and scalable MS2 mass spectra-based analogue search.
de Jonge NF, Louwen JJR, Chekmeneva E, Camuzeaux S, Vermeir FJ, Jansen RS, Huber F, van der Hooft JJJ. de Jonge NF, et al. Among authors: van der hooft jjj. Nat Commun. 2023 Mar 29;14(1):1752. doi: 10.1038/s41467-023-37446-4. Nat Commun. 2023. PMID: 36990978 Free PMC article.
Propagating annotations of molecular networks using in silico fragmentation.
da Silva RR, Wang M, Nothias LF, van der Hooft JJJ, Caraballo-Rodríguez AM, Fox E, Balunas MJ, Klassen JL, Lopes NP, Dorrestein PC. da Silva RR, et al. Among authors: van der hooft jjj. PLoS Comput Biol. 2018 Apr 18;14(4):e1006089. doi: 10.1371/journal.pcbi.1006089. eCollection 2018 Apr. PLoS Comput Biol. 2018. PMID: 29668671 Free PMC article.
Assessing Specialized Metabolite Diversity in the Cosmopolitan Plant Genus Euphorbia L.
Ernst M, Nothias LF, van der Hooft JJJ, Silva RR, Saslis-Lagoudakis CH, Grace OM, Martinez-Swatson K, Hassemer G, Funez LA, Simonsen HT, Medema MH, Staerk D, Nilsson N, Lovato P, Dorrestein PC, Rønsted N. Ernst M, et al. Among authors: van der hooft jjj. Front Plant Sci. 2019 Jul 2;10:846. doi: 10.3389/fpls.2019.00846. eCollection 2019. Front Plant Sci. 2019. PMID: 31333695 Free PMC article.
97 results