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iEEG-BIDS, extending the Brain Imaging Data Structure specification to human intracranial electrophysiology.
Holdgraf C, Appelhoff S, Bickel S, Bouchard K, D'Ambrosio S, David O, Devinsky O, Dichter B, Flinker A, Foster BL, Gorgolewski KJ, Groen I, Groppe D, Gunduz A, Hamilton L, Honey CJ, Jas M, Knight R, Lachaux JP, Lau JC, Lee-Messer C, Lundstrom BN, Miller KJ, Ojemann JG, Oostenveld R, Petridou N, Piantoni G, Pigorini A, Pouratian N, Ramsey NF, Stolk A, Swann NC, Tadel F, Voytek B, Wandell BA, Winawer J, Whitaker K, Zehl L, Hermes D. Holdgraf C, et al. Among authors: jas m. Sci Data. 2019 Jun 25;6(1):102. doi: 10.1038/s41597-019-0105-7. Sci Data. 2019. PMID: 31239438 Free PMC article.
MEG-BIDS, the brain imaging data structure extended to magnetoencephalography.
Niso G, Gorgolewski KJ, Bock E, Brooks TL, Flandin G, Gramfort A, Henson RN, Jas M, Litvak V, T Moreau J, Oostenveld R, Schoffelen JM, Tadel F, Wexler J, Baillet S. Niso G, et al. Among authors: jas m. Sci Data. 2018 Jun 19;5:180110. doi: 10.1038/sdata.2018.110. Sci Data. 2018. PMID: 29917016 Free PMC article.
PyBIDS: Python tools for BIDS datasets.
Yarkoni T, Markiewicz CJ, de la Vega A, Gorgolewski KJ, Salo T, Halchenko YO, McNamara Q, DeStasio K, Poline JB, Petrov D, Hayot-Sasson V, Nielson DM, Carlin J, Kiar G, Whitaker K, DuPre E, Wagner A, Tirrell LS, Jas M, Hanke M, Poldrack RA, Esteban O, Appelhoff S, Holdgraf C, Staden I, Thirion B, Kleinschmidt DF, Lee JA, Visconti di Oleggio Castello M, Notter MP, Blair R. Yarkoni T, et al. Among authors: jas m. J Open Source Softw. 2019;4(40):1294. doi: 10.21105/joss.01294. Epub 2019 Aug 12. J Open Source Softw. 2019. PMID: 32775955 Free PMC article. No abstract available.
MNE-BIDS: Organizing electrophysiological data into the BIDS format and facilitating their analysis.
Appelhoff S, Sanderson M, Brooks TL, van Vliet M, Quentin R, Holdgraf C, Chaumon M, Mikulan E, Tavabi K, Höchenberger R, Welke D, Brunner C, Rockhill AP, Larson E, Gramfort A, Jas M. Appelhoff S, et al. Among authors: jas m. J Open Source Softw. 2019;4(44):1896. doi: 10.21105/joss.01896. Epub 2019 Dec 18. J Open Source Softw. 2019. PMID: 35990374 Free PMC article.
MEG and EEG data analysis with MNE-Python.
Gramfort A, Luessi M, Larson E, Engemann DA, Strohmeier D, Brodbeck C, Goj R, Jas M, Brooks T, Parkkonen L, Hämäläinen M. Gramfort A, et al. Among authors: jas m. Front Neurosci. 2013 Dec 26;7:267. doi: 10.3389/fnins.2013.00267. eCollection 2013 Dec 26. Front Neurosci. 2013. PMID: 24431986 Free PMC article.
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