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Emerging role of carbonyl-carbonyl interactions in the classification of beta turns.
Protein Sci. 2024 Feb;33(2):e4868. doi: 10.1002/pro.4868.
Protein Sci. 2024.
PMID: 38100281
Free PMC article.
An automated pipeline integrating AlphaFold 2 and MODELLER for protein structure prediction.
Gil Zuluaga FH, D'Arminio N, Bardozzo F, Tagliaferri R, Marabotti A.
Gil Zuluaga FH, et al. Among authors: d arminio n.
Comput Struct Biotechnol J. 2023 Nov 3;21:5620-5629. doi: 10.1016/j.csbj.2023.10.056. eCollection 2023.
Comput Struct Biotechnol J. 2023.
PMID: 38047234
Free PMC article.
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Standardizing macromolecular structure files: further efforts are needed.
D'Arminio N, Giordano D, Scafuri B, Facchiano A, Marabotti A.
D'Arminio N, et al.
Trends Biochem Sci. 2023 Jul;48(7):590-596. doi: 10.1016/j.tibs.2023.03.002. Epub 2023 Apr 6.
Trends Biochem Sci. 2023.
PMID: 37031054
Free article.
Review.
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In Silico Analysis of the Effects of Omicron Spike Amino Acid Changes on the Interactions with Human Proteins.
D'Arminio N, Giordano D, Scafuri B, Biancaniello C, Petrillo M, Facchiano A, Marabotti A.
D'Arminio N, et al.
Molecules. 2022 Jul 28;27(15):4827. doi: 10.3390/molecules27154827.
Molecules. 2022.
PMID: 35956778
Free PMC article.
Item in Clipboard
Computational methods to assist in the discovery of pharmacological chaperones for rare diseases.
Scafuri B, Verdino A, D'Arminio N, Marabotti A.
Scafuri B, et al. Among authors: d arminio n.
Brief Bioinform. 2022 Sep 20;23(5):bbac198. doi: 10.1093/bib/bbac198.
Brief Bioinform. 2022.
PMID: 35595532
Review.
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