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Capture the in vivo intact RNA structurome by CAP-STRUCTURE-seq.
Methods Enzymol. 2023;691:127-152. doi: 10.1016/bs.mie.2023.05.008. Epub 2023 Jul 27.
Methods Enzymol. 2023.
PMID: 37914443
RNA G-quadruplex structure contributes to cold adaptation in plants.
Yang X, Yu H, Duncan S, Zhang Y, Cheema J, Liu H, Benjamin Miller J, Zhang J, Kwok CK, Zhang H, Ding Y.
Yang X, et al.
Nat Commun. 2022 Oct 20;13(1):6224. doi: 10.1038/s41467-022-34040-y.
Nat Commun. 2022.
PMID: 36266343
Free PMC article.
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RNA G-quadruplex structures exist and function in vivo in plants.
Yang X, Cheema J, Zhang Y, Deng H, Duncan S, Umar MI, Zhao J, Liu Q, Cao X, Kwok CK, Ding Y.
Yang X, et al.
Genome Biol. 2020 Sep 1;21(1):226. doi: 10.1186/s13059-020-02142-9.
Genome Biol. 2020.
PMID: 32873317
Free PMC article.
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G-quadruplex structures trigger RNA phase separation.
Zhang Y, Yang M, Duncan S, Yang X, Abdelhamid MAS, Huang L, Zhang H, Benfey PN, Waller ZAE, Ding Y.
Zhang Y, et al.
Nucleic Acids Res. 2019 Dec 16;47(22):11746-11754. doi: 10.1093/nar/gkz978.
Nucleic Acids Res. 2019.
PMID: 31722410
Free PMC article.
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FoldAtlas: a repository for genome-wide RNA structure probing data.
Norris M, Kwok CK, Cheema J, Hartley M, Morris RJ, Aviran S, Ding Y.
Norris M, et al.
Bioinformatics. 2017 Jan 15;33(2):306-308. doi: 10.1093/bioinformatics/btw611. Epub 2016 Sep 22.
Bioinformatics. 2017.
PMID: 27663500
Free PMC article.
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