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An Early Pandemic Analysis of SARS-CoV-2 Population Structure and Dynamics in Arizona.
Ladner JT, Larsen BB, Bowers JR, Hepp CM, Bolyen E, Folkerts M, Sheridan K, Pfeiffer A, Yaglom H, Lemmer D, Sahl JW, Kaelin EA, Maqsood R, Bokulich NA, Quirk G, Watts TD, Komatsu KK, Waddell V, Lim ES, Caporaso JG, Engelthaler DM, Worobey M, Keim P. Ladner JT, et al. Among authors: sheridan k. mBio. 2020 Sep 4;11(5):e02107-20. doi: 10.1128/mBio.02107-20. mBio. 2020. PMID: 32887735 Free PMC article.
Complete Genome Sequence of the Environmental Burkholderia pseudomallei Sequence Type 131 Isolate MSHR1435, Associated with a Chronic Melioidosis Infection.
Sahl JW, Mayo M, Price EP, Sarovich DS, Kaestli M, Pearson T, Williamson CHD, Nottingham R, Sheridan K, Wagner DM, Currie BJ, Keim P. Sahl JW, et al. Among authors: sheridan k. Genome Announc. 2018 Mar 15;6(11):e00072-18. doi: 10.1128/genomeA.00072-18. Genome Announc. 2018. PMID: 29545292 Free PMC article.
Phylogenetic analysis of West Nile Virus in Maricopa County, Arizona: Evidence for dynamic behavior of strains in two major lineages in the American Southwest.
Hepp CM, Cocking JH, Valentine M, Young SJ, Damian D, Samuels-Crow KE, Sheridan K, Fofanov VY, Furstenau TN, Busch JD, Erickson DE, Lancione RC, Smith K, Will J, Townsend J, Keim PS, Engelthaler DM. Hepp CM, et al. Among authors: sheridan k. PLoS One. 2018 Nov 26;13(11):e0205801. doi: 10.1371/journal.pone.0205801. eCollection 2018. PLoS One. 2018. PMID: 30475820 Free PMC article.
Genomic Analyses of Acute Flaccid Myelitis Cases among a Cluster in Arizona Provide Further Evidence of Enterovirus D68 Role.
Bowers JR, Valentine M, Harrison V, Fofanov VY, Gillece J, Delisle J, Patton B, Schupp J, Sheridan K, Lemmer D, Ostdiek S, Bains HK, Heim J, Sylvester T, Prasai S, Kretschmer M, Fowle N, Komatsu K, Brady S, Robinson S, Fitzpatrick K, Ostovar GA, Alsop E, Hutchins E, Jensen K, Keim P, Engelthaler DM. Bowers JR, et al. Among authors: sheridan k. mBio. 2019 Jan 22;10(1):e02262-18. doi: 10.1128/mBio.02262-18. mBio. 2019. PMID: 30670612 Free PMC article.
Domestic canines do not display evidence of gut microbial dysbiosis in the presence of Clostridioides (Clostridium) difficile, despite cellular susceptibility to its toxins.
Stone NE, Nunnally AE, Jimenez V Jr, Cope EK, Sahl JW, Sheridan K, Hornstra HM, Vinocur J, Settles EW, Headley KC, Williamson CHD, Rideout JR, Bolyen E, Caporaso JG, Terriquez J, Monroy FP, Busch JD, Keim P, Wagner DM. Stone NE, et al. Among authors: sheridan k. Anaerobe. 2019 Aug;58:53-72. doi: 10.1016/j.anaerobe.2019.03.017. Epub 2019 Apr 1. Anaerobe. 2019. PMID: 30946985 Free article.
St. Louis Encephalitis Virus in the Southwestern United States: A Phylogeographic Case for a Multi-Variant Introduction Event.
Ridenour CL, Cocking J, Poidmore S, Erickson D, Brock B, Valentine M, Roe CC, Young SJ, Henke JA, Hung KY, Wittie J, Stefanakos E, Sumner C, Ruedas M, Raman V, Seaton N, Bendik W, Hornstra O'Neill HM, Sheridan K, Centner H, Lemmer D, Fofanov V, Smith K, Will J, Townsend J, Foster JT, Keim PS, Engelthaler DM, Hepp CM. Ridenour CL, et al. Among authors: sheridan k. Front Genet. 2021 Jun 8;12:667895. doi: 10.3389/fgene.2021.667895. eCollection 2021. Front Genet. 2021. PMID: 34168675 Free PMC article.
Methods for sequencing the pandemic: benefits of rapid or high-throughput processing.
Folkerts ML, Lemmer D, Pfeiffer A, Vasquez D, French C, Jones A, Nguyen M, Larsen B, Porter WT, Sheridan K, Bowers JR, Engelthaler DM. Folkerts ML, et al. Among authors: sheridan k. F1000Res. 2021 Jan 26;10:ISCB Comm J-48. doi: 10.12688/f1000research.28352.2. eCollection 2021. F1000Res. 2021. PMID: 35342619 Free PMC article.
Large Clusters of Invasive emm49 Group A Streptococcus Identified within and across Arizona Healthcare Facilities through Statewide Genomic Surveillance System, 2019-2021.
Yaglom HD, Bhattarai R, Lemmer D, Rust L, Ridenour C, Chorbi K, Kim E, Centner H, Sheridan K, Jasso-Selles D, Erickson DE, French C, Bowers JR, Valentine M, Francis D, Hepp CM, Brady S, Komatsu KK, Engelthaler DM. Yaglom HD, et al. Among authors: sheridan k. J Infect Dis. 2024 Feb 19:jiae086. doi: 10.1093/infdis/jiae086. Online ahead of print. J Infect Dis. 2024. PMID: 38373258
Pan-Enterovirus Characterization Reveals Cryptic Circulation of Clinically Relevant Subtypes in Arizona Wastewater.
Erickson DE, Simmons KM, Barrand ZA, Ridenour CL, Hawkinson PB, Lemke L, Sellner SP, Brock BN, Rivas AN, Sheridan K, Lemmer D, Yaglom HD, Porter WT, Belanger M, Torrey RM, Stills AJR, McCormack K, Black M, Holmes W, Rostain D, Mikus J, Sotelo K, Haq E, Neupane R, Weiss J, Johnson J, Collins C, Avalle S, White C, Howard BJ, Maltinsky SA, Whealy RN, Gordon NB, Sahl JW, Pearson T, Fofanov VY, Furstenau T, Driebe EM, Caporaso JG, Barber J, Terriquez J, Engelthaler DM, Hepp CM. Erickson DE, et al. Among authors: sheridan k. medRxiv [Preprint]. 2024 Mar 20:2023.11.20.23297677. doi: 10.1101/2023.11.20.23297677. medRxiv. 2024. PMID: 38562876 Free PMC article. Preprint.
160 results