Kusalik AJ - Search Results

1

Associations of clinical and inflammatory biomarker clusters with juvenile idiopathic arthritis categories.

Rezaei E, Hogan D, Trost B, Kusalik AJ, Boire G, Cabral DA, Campillo S, Chédeville G, Chetaille AL, Dancey P, Duffy C, Duffy KW, Eng SWM, Gordon J, Guzman J, Houghton K, Huber AM, Jurencak R, Lang B, Laxer RM, Morishita K, Oen KG, Petty RE, Ramsey SE, Scherer SW, Scuccimarri R, Spiegel L, Stringer E, Taylor-Gjevre RM, Tse SML, Tucker LB, Turvey SE, Tupper S, Wintle RF, Yeung RSM, Rosenberg AM; BBOP Study Group. Rezaei E, et al. Among authors: kusalik aj. Rheumatology (Oxford). 2020 May 1;59(5):1066-1075. doi: 10.1093/rheumatology/kez382. Rheumatology (Oxford). 2020. PMID: 32321162

2

Strength in numbers: achieving greater accuracy in MHC-I binding prediction by combining the results from multiple prediction tools.

Trost B, Bickis M, Kusalik A. Trost B, et al. Immunome Res. 2007 Mar 24;3:5. doi: 10.1186/1745-7580-3-5. Immunome Res. 2007. PMID: 17381846 Free PMC article.

3

Rare peptide segments are found significantly more often in proto-oncoproteins than control proteins: implications for immunology and oncology.

Trost B, Kanduc D, Kusalik A. Trost B, et al. J R Soc Interface. 2009 Jan 6;6(30):123-7. doi: 10.1098/rsif.2008.0320. J R Soc Interface. 2009. PMID: 18948250 Free PMC article.

4

Codon number shapes peptide redundancy in the universal proteome composition.

Kusalik A, Trost B, Bickis M, Fasano C, Capone G, Kanduc D. Kusalik A, et al. Peptides. 2009 Oct;30(10):1940-4. doi: 10.1016/j.peptides.2009.06.035. Epub 2009 Jul 8. Peptides. 2009. PMID: 19591891

5

Analysis and comparison of the pan-genomic properties of sixteen well-characterized bacterial genera.

Trost B, Haakensen M, Pittet V, Ziola B, Kusalik A. Trost B, et al. BMC Microbiol. 2010 Oct 13;10:258. doi: 10.1186/1471-2180-10-258. BMC Microbiol. 2010. PMID: 20942950 Free PMC article.

6

No human protein is exempt from bacterial motifs, not even one.

Trost B, Lucchese G, Stufano A, Bickis M, Kusalik A, Kanduc D. Trost B, et al. Self Nonself. 2010 Oct;1(4):328-334. doi: 10.4161/self.1.4.13315. Self Nonself. 2010. PMID: 21487508 Free PMC article.

7

Bacterial peptides are intensively present throughout the human proteome.

Trost B, Kusalik A, Lucchese G, Kanduc D. Trost B, et al. Self Nonself. 2010 Jan;1(1):71-74. doi: 10.4161/self.1.1.9588. Self Nonself. 2010. PMID: 21559180 Free PMC article.

8

Computational prediction of eukaryotic phosphorylation sites.

Trost B, Kusalik A. Trost B, et al. Bioinformatics. 2011 Nov 1;27(21):2927-35. doi: 10.1093/bioinformatics/btr525. Epub 2011 Sep 16. Bioinformatics. 2011. PMID: 21926126 Review.

9

A systematic approach for analysis of peptide array kinome data.

Li Y, Arsenault RJ, Trost B, Slind J, Griebel PJ, Napper S, Kusalik A. Li Y, et al. Sci Signal. 2012 Apr 17;5(220):pl2. doi: 10.1126/scisignal.2002429. Sci Signal. 2012. PMID: 22510468

10

Comparing the similarity of different groups of bacteria to the human proteome.

Trost B, Pajon R, Jayaprakash T, Kusalik A. Trost B, et al. PLoS One. 2012;7(4):e34007. doi: 10.1371/journal.pone.0034007. Epub 2012 Apr 25. PLoS One. 2012. PMID: 22558081 Free PMC article.

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