Rare peptide segments are found significantly more often in proto-oncoproteins than control proteins: implications for immunology and oncology

J R Soc Interface. 2009 Jan 6;6(30):123-7. doi: 10.1098/rsif.2008.0320.

Abstract

There is some evidence to suggest that peptide segments that are found rarely or never in the host proteome play a role in the immune response to disease-related proteins, both those derived from microbes and those derived from the host itself. We conjecture that this pattern may extend to human proto-oncoproteins. Our hypothesis in this study is that the frequency of rare peptide segments in sets of human proto-oncoproteins is significantly higher than in sets of control proteins, and we show that this is the case. Possible immunological implications of this observation are discussed.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Humans
  • Immunity / genetics*
  • Peptides / genetics*
  • Proteomics / methods
  • Proto-Oncogene Proteins / genetics*
  • Sequence Homology

Substances

  • Peptides
  • Proto-Oncogene Proteins