Fookes M - Search Results

1

Distinct Salmonella Enteritidis lineages associated with enterocolitis in high-income settings and invasive disease in low-income settings.

Feasey NA, Hadfield J, Keddy KH, Dallman TJ, Jacobs J, Deng X, Wigley P, Barquist L, Langridge GC, Feltwell T, Harris SR, Mather AE, Fookes M, Aslett M, Msefula C, Kariuki S, Maclennan CA, Onsare RS, Weill FX, Le Hello S, Smith AM, McClelland M, Desai P, Parry CM, Cheesbrough J, French N, Campos J, Chabalgoity JA, Betancor L, Hopkins KL, Nair S, Humphrey TJ, Lunguya O, Cogan TA, Tapia MD, Sow SO, Tennant SM, Bornstein K, Levine MM, Lacharme-Lora L, Everett DB, Kingsley RA, Parkhill J, Heyderman RS, Dougan G, Gordon MA, Thomson NR. Feasey NA, et al. Among authors: fookes m. Nat Genet. 2016 Oct;48(10):1211-1217. doi: 10.1038/ng.3644. Epub 2016 Aug 22. Nat Genet. 2016. PMID: 27548315 Free PMC article.

2

Composition, acquisition, and distribution of the Vi exopolysaccharide-encoding Salmonella enterica pathogenicity island SPI-7.

Pickard D, Wain J, Baker S, Line A, Chohan S, Fookes M, Barron A, Gaora PO, Chabalgoity JA, Thanky N, Scholes C, Thomson N, Quail M, Parkhill J, Dougan G. Pickard D, et al. Among authors: fookes m. J Bacteriol. 2003 Sep;185(17):5055-65. doi: 10.1128/JB.185.17.5055-5065.2003. J Bacteriol. 2003. PMID: 12923078 Free PMC article.

3

The role of prophage-like elements in the diversity of Salmonella enterica serovars.

Thomson N, Baker S, Pickard D, Fookes M, Anjum M, Hamlin N, Wain J, House D, Bhutta Z, Chan K, Falkow S, Parkhill J, Woodward M, Ivens A, Dougan G. Thomson N, et al. Among authors: fookes m. J Mol Biol. 2004 May 28;339(2):279-300. doi: 10.1016/j.jmb.2004.03.058. J Mol Biol. 2004. PMID: 15136033

4

Analysis of the hypervariable region of the Salmonella enterica genome associated with tRNA(leuX).

Bishop AL, Baker S, Jenks S, Fookes M, Gaora PO, Pickard D, Anjum M, Farrar J, Hien TT, Ivens A, Dougan G. Bishop AL, et al. Among authors: fookes m. J Bacteriol. 2005 Apr;187(7):2469-82. doi: 10.1128/JB.187.7.2469-2482.2005. J Bacteriol. 2005. PMID: 15774890 Free PMC article.

5

Identification of core and variable components of the Salmonella enterica subspecies I genome by microarray.

Anjum MF, Marooney C, Fookes M, Baker S, Dougan G, Ivens A, Woodward MJ. Anjum MF, et al. Among authors: fookes m. Infect Immun. 2005 Dec;73(12):7894-905. doi: 10.1128/IAI.73.12.7894-7905.2005. Infect Immun. 2005. PMID: 16299280 Free PMC article.

6

Prophage sequences defining hot spots of genome variation in Salmonella enterica serovar Typhimurium can be used to discriminate between field isolates.

Cooke FJ, Wain J, Fookes M, Ivens A, Thomson N, Brown DJ, Threlfall EJ, Gunn G, Foster G, Dougan G. Cooke FJ, et al. Among authors: fookes m. J Clin Microbiol. 2007 Aug;45(8):2590-8. doi: 10.1128/JCM.00729-07. Epub 2007 May 23. J Clin Microbiol. 2007. PMID: 17522270 Free PMC article.

7

Characterization of the genomes of a diverse collection of Salmonella enterica serovar Typhimurium definitive phage type 104.

Cooke FJ, Brown DJ, Fookes M, Pickard D, Ivens A, Wain J, Roberts M, Kingsley RA, Thomson NR, Dougan G. Cooke FJ, et al. Among authors: fookes m. J Bacteriol. 2008 Dec;190(24):8155-62. doi: 10.1128/JB.00636-08. Epub 2008 Oct 10. J Bacteriol. 2008. PMID: 18849424 Free PMC article.

8

A strand-specific RNA-Seq analysis of the transcriptome of the typhoid bacillus Salmonella typhi.

Perkins TT, Kingsley RA, Fookes MC, Gardner PP, James KD, Yu L, Assefa SA, He M, Croucher NJ, Pickard DJ, Maskell DJ, Parkhill J, Choudhary J, Thomson NR, Dougan G. Perkins TT, et al. Among authors: fookes mc. PLoS Genet. 2009 Jul;5(7):e1000569. doi: 10.1371/journal.pgen.1000569. Epub 2009 Jul 17. PLoS Genet. 2009. PMID: 19609351 Free PMC article.

9

A simple method for directional transcriptome sequencing using Illumina technology.

Croucher NJ, Fookes MC, Perkins TT, Turner DJ, Marguerat SB, Keane T, Quail MA, He M, Assefa S, Bähler J, Kingsley RA, Parkhill J, Bentley SD, Dougan G, Thomson NR. Croucher NJ, et al. Among authors: fookes mc. Nucleic Acids Res. 2009 Dec;37(22):e148. doi: 10.1093/nar/gkp811. Nucleic Acids Res. 2009. PMID: 19815668 Free PMC article.

10

Genomic and phenotypic variation in epidemic-spanning Salmonella enterica serovar Enteritidis isolates.

Betancor L, Yim L, Fookes M, Martinez A, Thomson NR, Ivens A, Peters S, Bryant C, Algorta G, Kariuki S, Schelotto F, Maskell D, Dougan G, Chabalgoity JA. Betancor L, et al. Among authors: fookes m. BMC Microbiol. 2009 Nov 18;9:237. doi: 10.1186/1471-2180-9-237. BMC Microbiol. 2009. PMID: 19922635 Free PMC article.

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