van Eijk P - Search Results

1

Histone modification and chromatin remodeling during NER.

Waters R, van Eijk P, Reed S. Waters R, et al. Among authors: van eijk p. DNA Repair (Amst). 2015 Dec;36:105-113. doi: 10.1016/j.dnarep.2015.09.013. Epub 2015 Sep 16. DNA Repair (Amst). 2015. PMID: 26422133 Review.

2

The NER protein Rad33 shows functional homology to human Centrin2 and is involved in modification of Rad4.

den Dulk B, van Eijk P, de Ruijter M, Brandsma JA, Brouwer J. den Dulk B, et al. Among authors: van eijk p. DNA Repair (Amst). 2008 Jun 1;7(6):858-68. doi: 10.1016/j.dnarep.2008.02.004. Epub 2008 Apr 1. DNA Repair (Amst). 2008. PMID: 18387345

3

UV induced ubiquitination of the yeast Rad4-Rad23 complex promotes survival by regulating cellular dNTP pools.

Zhou Z, Humphryes N, van Eijk P, Waters R, Yu S, Kraehenbuehl R, Hartsuiker E, Reed SH. Zhou Z, et al. Among authors: van eijk p. Nucleic Acids Res. 2015 Sep 3;43(15):7360-70. doi: 10.1093/nar/gkv680. Epub 2015 Jul 6. Nucleic Acids Res. 2015. PMID: 26150418 Free PMC article.

4

Global genome nucleotide excision repair is organized into domains that promote efficient DNA repair in chromatin.

Yu S, Evans K, van Eijk P, Bennett M, Webster RM, Leadbitter M, Teng Y, Waters R, Jackson SP, Reed SH. Yu S, et al. Among authors: van eijk p. Genome Res. 2016 Oct;26(10):1376-1387. doi: 10.1101/gr.209106.116. Epub 2016 Jul 28. Genome Res. 2016. PMID: 27470111 Free PMC article.

5

Integrated Microarray-based Tools for Detection of Genomic DNA Damage and Repair Mechanisms.

van Eijk P, Teng Y, Bennet MR, Evans KE, Powell JR, Webster RM, Reed SH. van Eijk P, et al. Methods Mol Biol. 2018;1672:77-99. doi: 10.1007/978-1-4939-7306-4_7. Methods Mol Biol. 2018. PMID: 29043618

6

Nucleosome remodeling at origins of global genome-nucleotide excision repair occurs at the boundaries of higher-order chromatin structure.

van Eijk P, Nandi SP, Yu S, Bennett M, Leadbitter M, Teng Y, Reed SH. van Eijk P, et al. Genome Res. 2019 Jan;29(1):74-84. doi: 10.1101/gr.237198.118. Epub 2018 Dec 14. Genome Res. 2019. PMID: 30552104 Free PMC article.

7

Precision digital mapping of endogenous and induced genomic DNA breaks by INDUCE-seq.

Dobbs FM, van Eijk P, Fellows MD, Loiacono L, Nitsch R, Reed SH. Dobbs FM, et al. Among authors: van eijk p. Nat Commun. 2022 Jul 9;13(1):3989. doi: 10.1038/s41467-022-31702-9. Nat Commun. 2022. PMID: 35810156 Free PMC article.

8

DNA replication initiation shapes the mutational landscape and expression of the human genome.

Murat P, Perez C, Crisp A, van Eijk P, Reed SH, Guilbaud G, Sale JE. Murat P, et al. Among authors: van eijk p. Sci Adv. 2022 Nov 11;8(45):eadd3686. doi: 10.1126/sciadv.add3686. Epub 2022 Nov 9. Sci Adv. 2022. PMID: 36351018 Free PMC article.

9

To incise or not and where: SET-domain methyltransferases know.

Yancoskie MN, Maritz C, van Eijk P, Reed SH, Naegeli H. Yancoskie MN, et al. Among authors: van eijk p. Trends Biochem Sci. 2023 Apr;48(4):321-330. doi: 10.1016/j.tibs.2022.10.003. Epub 2022 Nov 7. Trends Biochem Sci. 2023. PMID: 36357311 Free article. Review.

10

Negative DNA supercoiling induces genome-wide Cas9 off-target activity.

Newton MD, Losito M, Smith QM, Parnandi N, Taylor BJ, Akcakaya P, Maresca M, van Eijk P, Reed SH, Boulton SJ, King GA, Cuomo ME, Rueda DS. Newton MD, et al. Among authors: van eijk p. Mol Cell. 2023 Oct 5;83(19):3533-3545.e5. doi: 10.1016/j.molcel.2023.09.008. Mol Cell. 2023. PMID: 37802026 Free article.

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