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RockerBox: analysis and filtering of massive proteomics search results.
van den Toorn HW, Muñoz J, Mohammed S, Raijmakers R, Heck AJ, van Breukelen B. van den Toorn HW, et al. Among authors: van breukelen b. J Proteome Res. 2011 Mar 4;10(3):1420-4. doi: 10.1021/pr1010185. Epub 2011 Feb 7. J Proteome Res. 2011. PMID: 21184612
Database independent proteomics analysis of the ostrich and human proteome.
Altelaar AF, Navarro D, Boekhorst J, van Breukelen B, Snel B, Mohammed S, Heck AJ. Altelaar AF, et al. Among authors: van breukelen b. Proc Natl Acad Sci U S A. 2012 Jan 10;109(2):407-12. doi: 10.1073/pnas.1108399108. Epub 2011 Dec 22. Proc Natl Acad Sci U S A. 2012. PMID: 22198768 Free PMC article.
qcML: an exchange format for quality control metrics from mass spectrometry experiments.
Walzer M, Pernas LE, Nasso S, Bittremieux W, Nahnsen S, Kelchtermans P, Pichler P, van den Toorn HW, Staes A, Vandenbussche J, Mazanek M, Taus T, Scheltema RA, Kelstrup CD, Gatto L, van Breukelen B, Aiche S, Valkenborg D, Laukens K, Lilley KS, Olsen JV, Heck AJ, Mechtler K, Aebersold R, Gevaert K, Vizcaíno JA, Hermjakob H, Kohlbacher O, Martens L. Walzer M, et al. Among authors: van den toorn hw, van breukelen b. Mol Cell Proteomics. 2014 Aug;13(8):1905-13. doi: 10.1074/mcp.M113.035907. Epub 2014 Apr 23. Mol Cell Proteomics. 2014. PMID: 24760958 Free PMC article.
Quantitative proteomics and transcriptomics of anaerobic and aerobic yeast cultures reveals post-transcriptional regulation of key cellular processes.
de Groot MJL, Daran-Lapujade P, van Breukelen B, Knijnenburg TA, de Hulster EAF, Reinders MJT, Pronk JT, Heck AJR, Slijper M. de Groot MJL, et al. Among authors: van breukelen b. Microbiology (Reading). 2007 Nov;153(Pt 11):3864-3878. doi: 10.1099/mic.0.2007/009969-0. Microbiology (Reading). 2007. PMID: 17975095 Free article.
82 results