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Genomes of 13 domesticated and wild rice relatives highlight genetic conservation, turnover and innovation across the genus Oryza.
Stein JC, Yu Y, Copetti D, Zwickl DJ, Zhang L, Zhang C, Chougule K, Gao D, Iwata A, Goicoechea JL, Wei S, Wang J, Liao Y, Wang M, Jacquemin J, Becker C, Kudrna D, Zhang J, Londono CEM, Song X, Lee S, Sanchez P, Zuccolo A, Ammiraju JSS, Talag J, Danowitz A, Rivera LF, Gschwend AR, Noutsos C, Wu CC, Kao SM, Zeng JW, Wei FJ, Zhao Q, Feng Q, El Baidouri M, Carpentier MC, Lasserre E, Cooke R, Rosa Farias DD, da Maia LC, Dos Santos RS, Nyberg KG, McNally KL, Mauleon R, Alexandrov N, Schmutz J, Flowers D, Fan C, Weigel D, Jena KK, Wicker T, Chen M, Han B, Henry R, Hsing YC, Kurata N, de Oliveira AC, Panaud O, Jackson SA, Machado CA, Sanderson MJ, Long M, Ware D, Wing RA. Stein JC, et al. Among authors: de oliveira ac. Nat Genet. 2018 Feb;50(2):285-296. doi: 10.1038/s41588-018-0040-0. Epub 2018 Jan 22. Nat Genet. 2018. PMID: 29358651
Comparative sequence analysis of MONOCULM1-orthologous regions in 14 Oryza genomes.
Lu F, Ammiraju JS, Sanyal A, Zhang S, Song R, Chen J, Li G, Sui Y, Song X, Cheng Z, de Oliveira AC, Bennetzen JL, Jackson SA, Wing RA, Chen M. Lu F, et al. Among authors: de oliveira ac. Proc Natl Acad Sci U S A. 2009 Feb 10;106(6):2071-6. doi: 10.1073/pnas.0812798106. Epub 2009 Jan 22. Proc Natl Acad Sci U S A. 2009. PMID: 19164767 Free PMC article.
In silico comparative analysis of SSR markers in plants.
Victoria FC, da Maia LC, de Oliveira AC. Victoria FC, et al. Among authors: de oliveira ac. BMC Plant Biol. 2011 Jan 19;11:15. doi: 10.1186/1471-2229-11-15. BMC Plant Biol. 2011. PMID: 21247422 Free PMC article.
Tandem repeat distribution of gene transcripts in three plant families.
da Maia LC, de Souza VQ, Kopp MM, de Carvalho FI, de Oliveira AC. da Maia LC, et al. Among authors: de carvalho fi, de souza vq, de oliveira ac. Genet Mol Biol. 2009 Oct;32(4):822-33. doi: 10.1590/S1415-47572009005000091. Epub 2009 Dec 1. Genet Mol Biol. 2009. PMID: 21637460 Free PMC article.
Comparative transcriptomics of rice plants under cold, iron, and salt stresses.
do Amaral MN, Arge LW, Benitez LC, Danielowski R, Silveira SF, Farias Dda R, de Oliveira AC, da Maia LC, Braga EJ. do Amaral MN, et al. Among authors: de oliveira ac. Funct Integr Genomics. 2016 Sep;16(5):567-79. doi: 10.1007/s10142-016-0507-y. Epub 2016 Jul 28. Funct Integr Genomics. 2016. PMID: 27468828
Evolutionary analysis of the SUB1 locus across the Oryza genomes.
Dos Santos RS, Farias DDR, Pegoraro C, Rombaldi CV, Fukao T, Wing RA, de Oliveira AC. Dos Santos RS, et al. Among authors: de oliveira ac. Rice (N Y). 2017 Dec;10(1):4. doi: 10.1186/s12284-016-0140-3. Epub 2017 Feb 7. Rice (N Y). 2017. PMID: 28176282 Free PMC article.
Publisher Correction: Genomes of 13 domesticated and wild rice relatives highlight genetic conservation, turnover and innovation across the genus Oryza.
Stein JC, Yu Y, Copetti D, Zwickl DJ, Zhang L, Zhang C, Chougule K, Gao D, Iwata A, Goicoechea JL, Wei S, Wang J, Liao Y, Wang M, Jacquemin J, Becker C, Kudrna D, Zhang J, Londono CEM, Song X, Lee S, Sanchez P, Zuccolo A, Ammiraju JSS, Talag J, Danowitz A, Rivera LF, Gschwend AR, Noutsos C, Wu CC, Kao SM, Zeng JW, Wei FJ, Zhao Q, Feng Q, El Baidouri M, Carpentier MC, Lasserre E, Cooke R, da Rosa Farias D, da Maia LC, Dos Santos RS, Nyberg KG, McNally KL, Mauleon R, Alexandrov N, Schmutz J, Flowers D, Fan C, Weigel D, Jena KK, Wicker T, Chen M, Han B, Henry R, Hsing YC, Kurata N, de Oliveira AC, Panaud O, Jackson SA, Machado CA, Sanderson MJ, Long M, Ware D, Wing RA. Stein JC, et al. Among authors: de oliveira ac. Nat Genet. 2018 Nov;50(11):1618. doi: 10.1038/s41588-018-0261-2. Nat Genet. 2018. PMID: 30291357
Insights into the transcriptional and post-transcriptional regulation of the rice SUMOylation machinery and into the role of two rice SUMO proteases.
Rosa MTG, Almeida DM, Pires IS, da Rosa Farias D, Martins AG, da Maia LC, de Oliveira AC, Saibo NJM, Oliveira MM, Abreu IA. Rosa MTG, et al. Among authors: oliveira mm, de oliveira ac. BMC Plant Biol. 2018 Dec 12;18(1):349. doi: 10.1186/s12870-018-1547-3. BMC Plant Biol. 2018. PMID: 30541427 Free PMC article.
556 results