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The interface of protein structure, protein biophysics, and molecular evolution.
Liberles DA, Teichmann SA, Bahar I, Bastolla U, Bloom J, Bornberg-Bauer E, Colwell LJ, de Koning AP, Dokholyan NV, Echave J, Elofsson A, Gerloff DL, Goldstein RA, Grahnen JA, Holder MT, Lakner C, Lartillot N, Lovell SC, Naylor G, Perica T, Pollock DD, Pupko T, Regan L, Roger A, Rubinstein N, Shakhnovich E, Sjölander K, Sunyaev S, Teufel AI, Thorne JL, Thornton JW, Weinreich DM, Whelan S. Liberles DA, et al. Among authors: de koning ap. Protein Sci. 2012 Jun;21(6):769-85. doi: 10.1002/pro.2071. Epub 2012 Apr 23. Protein Sci. 2012. PMID: 22528593 Free PMC article. Review.
Evidence for an ancient adaptive episode of convergent molecular evolution.
Castoe TA, de Koning AP, Kim HM, Gu W, Noonan BP, Naylor G, Jiang ZJ, Parkinson CL, Pollock DD. Castoe TA, et al. Among authors: de koning ap. Proc Natl Acad Sci U S A. 2009 Jun 2;106(22):8986-91. doi: 10.1073/pnas.0900233106. Epub 2009 Apr 28. Proc Natl Acad Sci U S A. 2009. PMID: 19416880 Free PMC article.
Phylogenetics, likelihood, evolution and complexity.
de Koning AP, Gu W, Castoe TA, Pollock DD. de Koning AP, et al. Bioinformatics. 2012 Nov 15;28(22):2989-90. doi: 10.1093/bioinformatics/bts555. Epub 2012 Sep 12. Bioinformatics. 2012. PMID: 22976081 Free PMC article.
Thousands of microsatellite loci from the venomous coralsnake Micrurus fulvius and variability of select loci across populations and related species.
Castoe TA, Streicher JW, Meik JM, Ingrasci MJ, Poole AW, de Koning AP, Campbell JA, Parkinson CL, Smith EN, Pollock DD. Castoe TA, et al. Among authors: de koning ap. Mol Ecol Resour. 2012 Nov;12(6):1105-13. doi: 10.1111/1755-0998.12000. Epub 2012 Sep 1. Mol Ecol Resour. 2012. PMID: 22938699 Free PMC article.
40 results