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Mapping the Contact Sites of the Escherichia coli Division-Initiating Proteins FtsZ and ZapA by BAMG Cross-Linking and Site-Directed Mutagenesis.
Roseboom W, Nazir MG, Meiresonne NY, Mohammadi T, Verheul J, Buncherd H, Bonvin AMJJ, de Koning LJ, de Koster CG, de Jong L, den Blaauwen T. Roseboom W, et al. Among authors: de jong l, de koning lj, de koster cg. Int J Mol Sci. 2018 Sep 26;19(10):2928. doi: 10.3390/ijms19102928. Int J Mol Sci. 2018. PMID: 30261644 Free PMC article.
Identification and quantitation of newly synthesized proteins in Escherichia coli by enrichment of azidohomoalanine-labeled peptides with diagonal chromatography.
Kramer G, Sprenger RR, Back J, Dekker HL, Nessen MA, van Maarseveen JH, de Koning LJ, Hellingwerf KJ, de Jong L, de Koster CG. Kramer G, et al. Among authors: de jong l, de koning lj, de koster cg. Mol Cell Proteomics. 2009 Jul;8(7):1599-611. doi: 10.1074/mcp.M800392-MCP200. Epub 2009 Mar 25. Mol Cell Proteomics. 2009. PMID: 19321432 Free PMC article.
Proteome-wide alterations in Escherichia coli translation rates upon anaerobiosis.
Kramer G, Sprenger RR, Nessen MA, Roseboom W, Speijer D, de Jong L, de Mattos MJ, Back J, de Koster CG. Kramer G, et al. Among authors: de jong l, de mattos mj, de koster cg. Mol Cell Proteomics. 2010 Nov;9(11):2508-16. doi: 10.1074/mcp.M110.001826. Epub 2010 Aug 16. Mol Cell Proteomics. 2010. PMID: 20713451 Free PMC article.
Selective enrichment and identification of cross-linked peptides to study 3-D structures of protein complexes by mass spectrometry.
Buncherd H, Nessen MA, Nouse N, Stelder SK, Roseboom W, Dekker HL, Arents JC, Smeenk LE, Wanner MJ, van Maarseveen JH, Yang X, Lewis PJ, de Koning LJ, de Koster CG, de Jong L. Buncherd H, et al. Among authors: de jong l, de koning lj, de koster cg. J Proteomics. 2012 Apr 3;75(7):2205-15. doi: 10.1016/j.jprot.2012.01.025. Epub 2012 Feb 4. J Proteomics. 2012. PMID: 22326961
Isolation of cross-linked peptides by diagonal strong cation exchange chromatography for protein complex topology studies by peptide fragment fingerprinting from large sequence databases.
Buncherd H, Roseboom W, Ghavim B, Du W, de Koning LJ, de Koster CG, de Jong L. Buncherd H, et al. Among authors: de jong l, de koning lj, de koster cg. J Chromatogr A. 2014 Jun 27;1348:34-46. doi: 10.1016/j.chroma.2014.04.083. Epub 2014 May 2. J Chromatogr A. 2014. PMID: 24819016
398 results