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Bacterial Virus Ontology; Coordinating across Databases.
Hulo C, Masson P, Toussaint A, Osumi-Sutherland D, de Castro E, Auchincloss AH, Poux S, Bougueleret L, Xenarios I, Le Mercier P. Hulo C, et al. Among authors: de castro e. Viruses. 2017 May 23;9(6):126. doi: 10.3390/v9060126. Viruses. 2017. PMID: 28545254 Free PMC article.
HAMAP: a database of completely sequenced microbial proteome sets and manually curated microbial protein families in UniProtKB/Swiss-Prot.
Lima T, Auchincloss AH, Coudert E, Keller G, Michoud K, Rivoire C, Bulliard V, de Castro E, Lachaize C, Baratin D, Phan I, Bougueleret L, Bairoch A. Lima T, et al. Among authors: de castro e. Nucleic Acids Res. 2009 Jan;37(Database issue):D471-8. doi: 10.1093/nar/gkn661. Epub 2008 Oct 11. Nucleic Acids Res. 2009. PMID: 18849571 Free PMC article.
The Universal Protein Resource (UniProt) in 2010.
UniProt Consortium. UniProt Consortium. Nucleic Acids Res. 2010 Jan;38(Database issue):D142-8. doi: 10.1093/nar/gkp846. Epub 2009 Oct 20. Nucleic Acids Res. 2010. PMID: 19843607 Free PMC article.
ViralZone: a knowledge resource to understand virus diversity.
Hulo C, de Castro E, Masson P, Bougueleret L, Bairoch A, Xenarios I, Le Mercier P. Hulo C, et al. Among authors: de castro e. Nucleic Acids Res. 2011 Jan;39(Database issue):D576-82. doi: 10.1093/nar/gkq901. Epub 2010 Oct 14. Nucleic Acids Res. 2011. PMID: 20947564 Free PMC article.
UniProt Knowledgebase: a hub of integrated protein data.
Magrane M; UniProt Consortium. Magrane M, et al. Database (Oxford). 2011 Mar 29;2011:bar009. doi: 10.1093/database/bar009. Print 2011. Database (Oxford). 2011. PMID: 21447597 Free PMC article.
ExPASy: SIB bioinformatics resource portal.
Artimo P, Jonnalagedda M, Arnold K, Baratin D, Csardi G, de Castro E, Duvaud S, Flegel V, Fortier A, Gasteiger E, Grosdidier A, Hernandez C, Ioannidis V, Kuznetsov D, Liechti R, Moretti S, Mostaguir K, Redaschi N, Rossier G, Xenarios I, Stockinger H. Artimo P, et al. Among authors: de castro e. Nucleic Acids Res. 2012 Jul;40(Web Server issue):W597-603. doi: 10.1093/nar/gks400. Epub 2012 May 31. Nucleic Acids Res. 2012. PMID: 22661580 Free PMC article.
New and continuing developments at PROSITE.
Sigrist CJ, de Castro E, Cerutti L, Cuche BA, Hulo N, Bridge A, Bougueleret L, Xenarios I. Sigrist CJ, et al. Among authors: de castro e. Nucleic Acids Res. 2013 Jan;41(Database issue):D344-7. doi: 10.1093/nar/gks1067. Epub 2012 Nov 17. Nucleic Acids Res. 2013. PMID: 23161676 Free PMC article.
215 results