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Deep learning methods in metagenomics: a review.
Roy G, Prifti E, Belda E, Zucker JD. Roy G, et al. Among authors: zucker jd. Microb Genom. 2024 Apr;10(4). doi: 10.1099/mgen.0.001231. Microb Genom. 2024. PMID: 38630611 Free article. Review.
Evidence of a causal and modifiable relationship between kidney function and circulating trimethylamine N-oxide.
Andrikopoulos P, Aron-Wisnewsky J, Chakaroun R, Myridakis A, Forslund SK, Nielsen T, Adriouch S, Holmes B, Chilloux J, Vieira-Silva S, Falony G, Salem JE, Andreelli F, Belda E, Kieswich J, Chechi K, Puig-Castellvi F, Chevalier M, Le Chatelier E, Olanipekun MT, Hoyles L, Alves R, Helft G, Isnard R, Køber L, Coelho LP, Rouault C, Gauguier D, Gøtze JP, Prifti E, Froguel P; MetaCardis Consortium; Zucker JD, Bäckhed F, Vestergaard H, Hansen T, Oppert JM, Blüher M, Nielsen J, Raes J, Bork P, Yaqoob MM, Stumvoll M, Pedersen O, Ehrlich SD, Clément K, Dumas ME. Andrikopoulos P, et al. Among authors: zucker jd. Nat Commun. 2023 Sep 20;14(1):5843. doi: 10.1038/s41467-023-39824-4. Nat Commun. 2023. PMID: 37730687 Free PMC article.
Metabolic engineering to improve production of 3-hydroxypropionic acid from corn-stover hydrolysate in Aspergillus species.
Dai Z, Pomraning KR, Deng S, Kim J, Campbell KB, Robles AL, Hofstad BA, Munoz N, Gao Y, Lemmon T, Swita MS, Zucker JD, Kim YM, Burnum-Johnson KE, Magnuson JK. Dai Z, et al. Among authors: zucker jd. Biotechnol Biofuels Bioprod. 2023 Mar 29;16(1):53. doi: 10.1186/s13068-023-02288-1. Biotechnol Biofuels Bioprod. 2023. PMID: 36991437 Free PMC article.
Circulating SARS-CoV-2+ megakaryocytes are associated with severe viral infection in COVID-19.
Fortmann SD, Patton MJ, Frey BF, Tipper JL, Reddy SB, Vieira CP, Hanumanthu VS, Sterrett S, Floyd JL, Prasad R, Zucker JD, Crouse AB, Huls F, Chkheidze R, Li P, Erdmann NB, Harrod KS, Gaggar A, Goepfert PA, Grant MB, Might M. Fortmann SD, et al. Among authors: zucker jd. Blood Adv. 2023 Aug 8;7(15):4200-4214. doi: 10.1182/bloodadvances.2022009022. Blood Adv. 2023. PMID: 36920790 Free PMC article.
Itaconic acid production is regulated by LaeA in Aspergillus pseudoterreus.
Pomraning KR, Dai Z, Munoz N, Kim YM, Gao Y, Deng S, Lemmon T, Swita MS, Zucker JD, Kim J, Mondo SJ, Panisko E, Burnet MC, Webb-Robertson BM, Hofstad B, Baker SE, Burnum-Johnson KE, Magnuson JK; Agile BioFoundry. Pomraning KR, et al. Among authors: zucker jd. Metab Eng Commun. 2022 Aug 24;15:e00203. doi: 10.1016/j.mec.2022.e00203. eCollection 2022 Dec. Metab Eng Commun. 2022. PMID: 36065328 Free PMC article.
The human gut microbiota contributes to type-2 diabetes non-resolution 5-years after Roux-en-Y gastric bypass.
Debédat J, Le Roy T, Voland L, Belda E, Alili R, Adriouch S, Bel Lassen P, Kasahara K, Hutchison E, Genser L, Torres L, Gamblin C, Rouault C, Zucker JD, Kapel N, Poitou C, Marcelin G, Rey FE, Aron-Wisnewsky J, Clément K. Debédat J, et al. Among authors: zucker jd. Gut Microbes. 2022 Jan-Dec;14(1):2050635. doi: 10.1080/19490976.2022.2050635. Gut Microbes. 2022. PMID: 35435140 Free PMC article.
77 results