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Determining the Virulence Properties of Escherichia coli ST131 Containing Bacteriocin-Encoding Plasmids Using Short- and Long-Read Sequencing and Comparing Them with Those of Other E. coli Lineages.
da Cruz Campos AC, Cavallo FM, L Andrade N, van Dijl JM, Couto N, Zrimec J, Lo Ten Foe JR, P Rosa AC, V Damasco P, Friedrich AW, Chlebowicz-Flissikowska MA, Rossen JWA. da Cruz Campos AC, et al. Among authors: zrimec j. Microorganisms. 2019 Nov 6;7(11):534. doi: 10.3390/microorganisms7110534. Microorganisms. 2019. PMID: 31698849 Free PMC article.
Toward learning the principles of plant gene regulation.
Zrimec J, Zelezniak A, Gruden K. Zrimec J, et al. Trends Plant Sci. 2022 Dec;27(12):1206-1208. doi: 10.1016/j.tplants.2022.08.010. Epub 2022 Sep 11. Trends Plant Sci. 2022. PMID: 36100536 Free article.
Controlling gene expression with deep generative design of regulatory DNA.
Zrimec J, Fu X, Muhammad AS, Skrekas C, Jauniskis V, Speicher NK, Börlin CS, Verendel V, Chehreghani MH, Dubhashi D, Siewers V, David F, Nielsen J, Zelezniak A. Zrimec J, et al. Nat Commun. 2022 Aug 30;13(1):5099. doi: 10.1038/s41467-022-32818-8. Nat Commun. 2022. PMID: 36042233 Free PMC article.
Learning deep representations of enzyme thermal adaptation.
Li G, Buric F, Zrimec J, Viknander S, Nielsen J, Zelezniak A, Engqvist MKM. Li G, et al. Among authors: zrimec j. Protein Sci. 2022 Dec;31(12):e4480. doi: 10.1002/pro.4480. Protein Sci. 2022. PMID: 36261883 Free PMC article.
Learning the Regulatory Code of Gene Expression.
Zrimec J, Buric F, Kokina M, Garcia V, Zelezniak A. Zrimec J, et al. Front Mol Biosci. 2021 Jun 10;8:673363. doi: 10.3389/fmolb.2021.673363. eCollection 2021. Front Mol Biosci. 2021. PMID: 34179082 Free PMC article. Review.
18 results