Zoltowski B - Search Results

1

SSnet: A Deep Learning Approach for Protein-Ligand Interaction Prediction.

Verma N, Qu X, Trozzi F, Elsaied M, Karki N, Tao Y, Zoltowski B, Larson EC, Kraka E. Verma N, et al. Among authors: zoltowski b. Int J Mol Sci. 2021 Jan 30;22(3):1392. doi: 10.3390/ijms22031392. Int J Mol Sci. 2021. PMID: 33573266 Free PMC article.

2

Chemical and structural analysis of a photoactive vertebrate cryptochrome from pigeon.

Zoltowski BD, Chelliah Y, Wickramaratne A, Jarocha L, Karki N, Xu W, Mouritsen H, Hore PJ, Hibbs RE, Green CB, Takahashi JS. Zoltowski BD, et al. Proc Natl Acad Sci U S A. 2019 Sep 24;116(39):19449-19457. doi: 10.1073/pnas.1907875116. Epub 2019 Sep 4. Proc Natl Acad Sci U S A. 2019. PMID: 31484780 Free PMC article.

3

Deciphering the Allosteric Process of the Phaeodactylum tricornutum Aureochrome 1a LOV Domain.

Tian H, Trozzi F, Zoltowski BD, Tao P. Tian H, et al. J Phys Chem B. 2020 Oct 15;124(41):8960-8972. doi: 10.1021/acs.jpcb.0c05842. Epub 2020 Oct 1. J Phys Chem B. 2020. PMID: 32970438 Free PMC article.

4

Steric and Electronic Interactions at Gln154 in ZEITLUPE Induce Reorganization of the LOV Domain Dimer Interface.

Pudasaini A, Green R, Song YH, Blumenfeld A, Karki N, Imaizumi T, Zoltowski BD. Pudasaini A, et al. Among authors: zoltowski bd. Biochemistry. 2021 Jan 19;60(2):95-103. doi: 10.1021/acs.biochem.0c00819. Epub 2020 Dec 18. Biochemistry. 2021. PMID: 33337855 Free PMC article.

5

Predicting Potential SARS-COV-2 Drugs-In Depth Drug Database Screening Using Deep Neural Network Framework SSnet, Classical Virtual Screening and Docking.

Karki N, Verma N, Trozzi F, Tao P, Kraka E, Zoltowski B. Karki N, et al. Among authors: zoltowski b. Int J Mol Sci. 2021 Feb 4;22(4):1573. doi: 10.3390/ijms22041573. Int J Mol Sci. 2021. PMID: 33557253 Free PMC article.

6

Cryptochromes: Photochemical and structural insight into magnetoreception.

Karki N, Vergish S, Zoltowski BD. Karki N, et al. Among authors: zoltowski bd. Protein Sci. 2021 Aug;30(8):1521-1534. doi: 10.1002/pro.4124. Epub 2021 Jun 12. Protein Sci. 2021. PMID: 33993574 Free PMC article. Review.

7

Dimeric allostery mechanism of the plant circadian clock photoreceptor ZEITLUPE.

Trozzi F, Wang F, Verkhivker G, Zoltowski BD, Tao P. Trozzi F, et al. Among authors: zoltowski bd. PLoS Comput Biol. 2021 Jul 26;17(7):e1009168. doi: 10.1371/journal.pcbi.1009168. eCollection 2021 Jul. PLoS Comput Biol. 2021. PMID: 34310591 Free PMC article.

8

Allosteric control of ACE2 peptidase domain dynamics.

Trozzi F, Karki N, Song Z, Verma N, Kraka E, Zoltowski BD, Tao P. Trozzi F, et al. Among authors: zoltowski bd. Org Biomol Chem. 2022 May 4;20(17):3605-3618. doi: 10.1039/d2ob00606e. Org Biomol Chem. 2022. PMID: 35420112 Free PMC article.

9

Allosteric regulation in STAT3 interdomains is mediated by a rigid core: SH2 domain regulation by CCD in D170A variant.

Zhao T, Karki N, Zoltowski BD, Matthews DA. Zhao T, et al. Among authors: zoltowski bd. PLoS Comput Biol. 2022 Dec 21;18(12):e1010794. doi: 10.1371/journal.pcbi.1010794. eCollection 2022 Dec. PLoS Comput Biol. 2022. PMID: 36542668 Free PMC article.

10

Allosteric mechanism of the circadian protein Vivid resolved through Markov state model and machine learning analysis.

Zhou H, Dong Z, Verkhivker G, Zoltowski BD, Tao P. Zhou H, et al. PLoS Comput Biol. 2019 Feb 19;15(2):e1006801. doi: 10.1371/journal.pcbi.1006801. eCollection 2019 Feb. PLoS Comput Biol. 2019. PMID: 30779735 Free PMC article.

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