Zoete V - Search Results

1

Trametinib Induces the Stabilization of a Dual GNAQ p.Gly48Leu- and FGFR4 p.Cys172Gly-Mutated Uveal Melanoma. The Role of Molecular Modelling in Personalized Oncology.

Krebs FS, Gérard C, Wicky A, Aedo-Lopez V, Missiaglia E, Bisig B, Trimech M, Michielin O, Homicsko K, Zoete V. Krebs FS, et al. Among authors: zoete v. Int J Mol Sci. 2020 Oct 28;21(21):8021. doi: 10.3390/ijms21218021. Int J Mol Sci. 2020. PMID: 33126538 Free PMC article.

2

Relation between sequence and structure of HIV-1 protease inhibitor complexes: a model system for the analysis of protein flexibility.

Zoete V, Michielin O, Karplus M. Zoete V, et al. J Mol Biol. 2002 Jan 4;315(1):21-52. doi: 10.1006/jmbi.2001.5173. J Mol Biol. 2002. PMID: 11771964

3

Protein-ligand binding free energy estimation using molecular mechanics and continuum electrostatics. Application to HIV-1 protease inhibitors.

Zoete V, Michielin O, Karplus M. Zoete V, et al. J Comput Aided Mol Des. 2003 Dec;17(12):861-80. doi: 10.1023/b:jcam.0000021882.99270.4c. J Comput Aided Mol Des. 2003. PMID: 15124934

4

Structural assessment of single amino acid mutations: application to TP53 function.

Yip YL, Zoete V, Scheib H, Michielin O. Yip YL, et al. Among authors: zoete v. Hum Mutat. 2006 Sep;27(9):926-37. doi: 10.1002/humu.20379. Hum Mutat. 2006. PMID: 16917930

5

Combined simulation and mutagenesis analyses reveal the involvement of key residues for peroxisome proliferator-activated receptor alpha helix 12 dynamic behavior.

Michalik L, Zoete V, Krey G, Grosdidier A, Gelman L, Chodanowski P, Feige JN, Desvergne B, Wahli W, Michielin O. Michalik L, et al. Among authors: zoete v. J Biol Chem. 2007 Mar 30;282(13):9666-9677. doi: 10.1074/jbc.M610523200. Epub 2007 Jan 2. J Biol Chem. 2007. PMID: 17200111 Free article.

6

Peroxisome proliferator-activated receptor structures: ligand specificity, molecular switch and interactions with regulators.

Zoete V, Grosdidier A, Michielin O. Zoete V, et al. Biochim Biophys Acta. 2007 Aug;1771(8):915-25. doi: 10.1016/j.bbalip.2007.01.007. Epub 2007 Jan 18. Biochim Biophys Acta. 2007. PMID: 17317294 Review.

7

Comparison between computational alanine scanning and per-residue binding free energy decomposition for protein-protein association using MM-GBSA: application to the TCR-p-MHC complex.

Zoete V, Michielin O. Zoete V, et al. Proteins. 2007 Jun 1;67(4):1026-47. doi: 10.1002/prot.21395. Proteins. 2007. PMID: 17377991

8

EADock: docking of small molecules into protein active sites with a multiobjective evolutionary optimization.

Grosdidier A, Zoete V, Michielin O. Grosdidier A, et al. Among authors: zoete v. Proteins. 2007 Jun 1;67(4):1010-25. doi: 10.1002/prot.21367. Proteins. 2007. PMID: 17380512

9

Model structure of human APOBEC3G.

Zhang KL, Mangeat B, Ortiz M, Zoete V, Trono D, Telenti A, Michielin O. Zhang KL, et al. Among authors: zoete v. PLoS One. 2007 Apr 18;2(4):e378. doi: 10.1371/journal.pone.0000378. PLoS One. 2007. PMID: 17440614 Free PMC article.

10

A novel population of human melanoma-specific CD8 T cells recognizes Melan-AMART-1 immunodominant nonapeptide but not the corresponding decapeptide.

Derré L, Ferber M, Touvrey C, Devevre E, Zoete V, Leimgruber A, Romero P, Michielin O, Lévy F, Speiser DE. Derré L, et al. Among authors: zoete v. J Immunol. 2007 Dec 1;179(11):7635-45. doi: 10.4049/jimmunol.179.11.7635. J Immunol. 2007. PMID: 18025209

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