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Bronchoalveolar Lavage Fluid from COPD Patients Reveals More Compounds Associated with Disease than Matched Plasma.
Halper-Stromberg E, Gillenwater L, Cruickshank-Quinn C, O'Neal WK, Reisdorph N, Petrache I, Zhuang Y, Labaki WW, Curtis JL, Wells J, Rennard S, Pratte KA, Woodruff P, Stringer KA, Kechris K, Bowler RP. Halper-Stromberg E, et al. Among authors: zhuang y. Metabolites. 2019 Jul 25;9(8):157. doi: 10.3390/metabo9080157. Metabolites. 2019. PMID: 31349744 Free PMC article.
Unsupervised discovery of phenotype-specific multi-omics networks.
Shi WJ, Zhuang Y, Russell PH, Hobbs BD, Parker MM, Castaldi PJ, Rudra P, Vestal B, Hersh CP, Saba LM, Kechris K. Shi WJ, et al. Among authors: zhuang y. Bioinformatics. 2019 Nov 1;35(21):4336-4343. doi: 10.1093/bioinformatics/btz226. Bioinformatics. 2019. PMID: 30957844 Free PMC article.
Plasma Metabolomic Signatures of Chronic Obstructive Pulmonary Disease and the Impact of Genetic Variants on Phenotype-Driven Modules.
Gillenwater LA, Pratte KA, Hobbs BD, Cho MH, Zhuang Y, Halper-Stromberg E, Cruickshank-Quinn C, Reisdorph N, Petrache I, Labaki WW, O'Neal WK, Ortega VE, Jones DP, Uppal K, Jacobson S, Michelotti G, Wendt CH, Kechris KJ, Bowler RP. Gillenwater LA, et al. Among authors: zhuang y. Netw Syst Med. 2020 Dec 1;3(1):159-181. doi: 10.1089/nsm.2020.0009. Epub 2020 Dec 31. Netw Syst Med. 2020. PMID: 33987620 Free PMC article.
Multi-omics subtyping pipeline for chronic obstructive pulmonary disease.
Gillenwater LA, Helmi S, Stene E, Pratte KA, Zhuang Y, Schuyler RP, Lange L, Castaldi PJ, Hersh CP, Banaei-Kashani F, Bowler RP, Kechris KJ. Gillenwater LA, et al. Among authors: zhuang y. PLoS One. 2021 Aug 25;16(8):e0255337. doi: 10.1371/journal.pone.0255337. eCollection 2021. PLoS One. 2021. PMID: 34432807 Free PMC article.
Deep learning on graphs for multi-omics classification of COPD.
Zhuang Y, Xing F, Ghosh D, Hobbs BD, Hersh CP, Banaei-Kashani F, Bowler RP, Kechris K. Zhuang Y, et al. PLoS One. 2023 Apr 21;18(4):e0284563. doi: 10.1371/journal.pone.0284563. eCollection 2023. PLoS One. 2023. PMID: 37083575 Free PMC article.
3,855 results