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A comparison of methods to detect low levels of Salmonella enterica in surface waters to support antimicrobial resistance surveillance efforts performed in multiple laboratories.
Kraft AL, Wells JE, Frye JG, Ibekwe AM, Durso LM, Hiott L, East C, McConn BR, Franklin AM, Boczek LA, Garland JL, Kabera C, McDermott PF, Ottesen AR, Zheng J, Cook KL, Sharma M. Kraft AL, et al. Among authors: zheng j. Sci Total Environ. 2023 Dec 20;905:167189. doi: 10.1016/j.scitotenv.2023.167189. Epub 2023 Sep 23. Sci Total Environ. 2023. PMID: 37748604 Free article.
Genomics of foodborne pathogens for microbial food safety.
Allard MW, Bell R, Ferreira CM, Gonzalez-Escalona N, Hoffmann M, Muruvanda T, Ottesen A, Ramachandran P, Reed E, Sharma S, Stevens E, Timme R, Zheng J, Brown EW. Allard MW, et al. Among authors: zheng j. Curr Opin Biotechnol. 2018 Feb;49:224-229. doi: 10.1016/j.copbio.2017.11.002. Epub 2017 Nov 21. Curr Opin Biotechnol. 2018. PMID: 29169072 Review.
Water Microbiota from a Commercial Alfalfa Sprout Crop over 4 Days of Growth.
Reed E, Sanderson R, Sanderson B, Ramachandran P, Commichaux S, Brown E, Zheng J, Strain E, Ottesen A. Reed E, et al. Among authors: zheng j. Microbiol Resour Announc. 2021 Jan 14;10(2):e00906-20. doi: 10.1128/MRA.00906-20. Microbiol Resour Announc. 2021. PMID: 33446581 Free PMC article.
bettercallsal: better calling of Salmonella serotypes from enrichment cultures using shotgun metagenomic profiling and its application in an outbreak setting.
Konganti K, Reed E, Mammel M, Kayikcioglu T, Binet R, Jarvis K, Ferreira CM, Bell RL, Zheng J, Windsor AM, Ottesen A, Grim CJ, Ramachandran P. Konganti K, et al. Among authors: zheng j. Front Microbiol. 2023 Aug 2;14:1200983. doi: 10.3389/fmicb.2023.1200983. eCollection 2023. Front Microbiol. 2023. PMID: 37601366 Free PMC article.
Metagenomic survey of antimicrobial resistance (AMR) in Maryland surface waters differentiated by high and low human impact.
Kocurek B, Behling S, Martin G, Ramachandran P, Reed E, Grim C, Mammel M, Zheng J, Franklin A, Garland J, Tadesse DA, Sharma M, Tyson GH, Kabera C, Tate H, McDermott PF, Strain E, Ottesen A. Kocurek B, et al. Among authors: zheng j. Microbiol Resour Announc. 2024 Jan 17;13(1):e0047723. doi: 10.1128/MRA.00477-23. Epub 2023 Nov 30. Microbiol Resour Announc. 2024. PMID: 38032210 Free PMC article.
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