Zhaxybayeva O - Search Results

1

Machine-Learning Classification Suggests That Many Alphaproteobacterial Prophages May Instead Be Gene Transfer Agents.

Kogay R, Neely TB, Birnbaum DP, Hankel CR, Shakya M, Zhaxybayeva O. Kogay R, et al. Among authors: zhaxybayeva o. Genome Biol Evol. 2019 Oct 1;11(10):2941-2953. doi: 10.1093/gbe/evz206. Genome Biol Evol. 2019. PMID: 31560374 Free PMC article.

2

Functional and Evolutionary Characterization of a Gene Transfer Agent's Multilocus "Genome".

Hynes AP, Shakya M, Mercer RG, Grüll MP, Bown L, Davidson F, Steffen E, Matchem H, Peach ME, Berger T, Grebe K, Zhaxybayeva O, Lang AS. Hynes AP, et al. Among authors: zhaxybayeva o. Mol Biol Evol. 2016 Oct;33(10):2530-43. doi: 10.1093/molbev/msw125. Epub 2016 Jun 24. Mol Biol Evol. 2016. PMID: 27343288 Free PMC article.

3

Insights into origin and evolution of α-proteobacterial gene transfer agents.

Shakya M, Soucy SM, Zhaxybayeva O. Shakya M, et al. Among authors: zhaxybayeva o. Virus Evol. 2017 Dec 7;3(2):vex036. doi: 10.1093/ve/vex036. eCollection 2017 Jul. Virus Evol. 2017. PMID: 29250433 Free PMC article.

4

Selection for Reducing Energy Cost of Protein Production Drives the GC Content and Amino Acid Composition Bias in Gene Transfer Agents.

Kogay R, Wolf YI, Koonin EV, Zhaxybayeva O. Kogay R, et al. Among authors: zhaxybayeva o. mBio. 2020 Jul 14;11(4):e01206-20. doi: 10.1128/mBio.01206-20. mBio. 2020. PMID: 32665274 Free PMC article.

5

Erratum for Kogay et al., "Selection for Reducing Energy Cost of Protein Production Drives the GC Content and Amino Acid Composition Bias in Gene Transfer Agents".

Kogay R, Wolf YI, Koonin EV, Zhaxybayeva O. Kogay R, et al. Among authors: zhaxybayeva o. mBio. 2020 Dec 22;11(6):e03139-20. doi: 10.1128/mBio.03139-20. mBio. 2020. PMID: 33443100 Free PMC article. No abstract available.

6

Evolution of DNA packaging in gene transfer agents.

Esterman ES, Wolf YI, Kogay R, Koonin EV, Zhaxybayeva O. Esterman ES, et al. Among authors: zhaxybayeva o. Virus Evol. 2021 Feb 19;7(1):veab015. doi: 10.1093/ve/veab015. eCollection 2021 Jan. Virus Evol. 2021. PMID: 33732503 Free PMC article.

7

Formal recognition and classification of gene transfer agents as viriforms.

Kogay R, Koppenhöfer S, Beatty JT, Kuhn JH, Lang AS, Zhaxybayeva O. Kogay R, et al. Among authors: zhaxybayeva o. Virus Evol. 2022 Oct 15;8(2):veac100. doi: 10.1093/ve/veac100. eCollection 2022. Virus Evol. 2022. PMID: 36381234 Free PMC article.

8

Early Divergence and Gene Exchange Highways in the Evolutionary History of Mesoaciditogales.

Farrell AA, Nesbø CL, Zhaxybayeva O. Farrell AA, et al. Among authors: zhaxybayeva o. Genome Biol Evol. 2023 Sep 4;15(9):evad156. doi: 10.1093/gbe/evad156. Genome Biol Evol. 2023. PMID: 37616556 Free PMC article.

9

Co-evolution of gene transfer agents and their alphaproteobacterial hosts.

Kogay R, Zhaxybayeva O. Kogay R, et al. Among authors: zhaxybayeva o. J Bacteriol. 2024 Feb 22;206(2):e0039823. doi: 10.1128/jb.00398-23. Epub 2024 Jan 19. J Bacteriol. 2024. PMID: 38240570 Free PMC article.

10

Genome sequence of the mesophilic Thermotogales bacterium Mesotoga prima MesG1.Ag.4.2 reveals the largest Thermotogales genome to date.

Zhaxybayeva O, Swithers KS, Foght J, Green AG, Bruce D, Detter C, Han S, Teshima H, Han J, Woyke T, Pitluck S, Nolan M, Ivanova N, Pati A, Land ML, Dlutek M, Doolittle WF, Noll KM, Nesbø CL. Zhaxybayeva O, et al. Genome Biol Evol. 2012;4(8):700-8. doi: 10.1093/gbe/evs059. Epub 2012 Jul 12. Genome Biol Evol. 2012. PMID: 22798451 Free PMC article.

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