Zhao Y - Search Results

1

Bioinformatics applications on Apache Spark.

Guo R, Zhao Y, Zou Q, Fang X, Peng S. Guo R, et al. Among authors: zhao y. Gigascience. 2018 Aug 1;7(8):giy098. doi: 10.1093/gigascience/giy098. Gigascience. 2018. PMID: 30101283 Free PMC article. Review.

2

Deep learning in omics: a survey and guideline.

Zhang Z, Zhao Y, Liao X, Shi W, Li K, Zou Q, Peng S. Zhang Z, et al. Among authors: zhao y. Brief Funct Genomics. 2019 Feb 14;18(1):41-57. doi: 10.1093/bfgp/ely030. Brief Funct Genomics. 2019. PMID: 30265280 Review.

3

SupCAM: Chromosome cluster types identification using supervised contrastive learning with category-variant augmentation and self-margin loss.

Luo C, Wu Y, Zhao Y. Luo C, et al. Among authors: zhao y. Front Genet. 2023 Feb 15;14:1109269. doi: 10.3389/fgene.2023.1109269. eCollection 2023. Front Genet. 2023. PMID: 36873945 Free PMC article.

4

Faster and more accurate global protein function assignment from protein interaction networks using the MFGO algorithm.

Sun S, Zhao Y, Jiao Y, Yin Y, Cai L, Zhang Y, Lu H, Chen R, Bu D. Sun S, et al. Among authors: zhao y. FEBS Lett. 2006 Mar 20;580(7):1891-6. doi: 10.1016/j.febslet.2006.02.053. Epub 2006 Feb 28. FEBS Lett. 2006. PMID: 16516894 Free article.

5

DeepFusion: A deep bimodal information fusion network for unraveling protein-RNA interactions using in vivo RNA structures.

Qiao Y, Yang R, Liu Y, Chen J, Zhao L, Huo P, Wang Z, Bu D, Wu Y, Zhao Y. Qiao Y, et al. Among authors: zhao y, zhao l. Comput Struct Biotechnol J. 2023 Dec 30;23:617-625. doi: 10.1016/j.csbj.2023.12.040. eCollection 2024 Dec. Comput Struct Biotechnol J. 2023. PMID: 38274994 Free PMC article.

6

Biological knowledge graph-guided investigation of immune therapy response in cancer with graph neural network.

Zhao L, Qi X, Chen Y, Qiao Y, Bu D, Wu Y, Luo Y, Wang S, Zhang R, Zhao Y. Zhao L, et al. Among authors: zhao y. Brief Bioinform. 2023 Mar 19;24(2):bbad023. doi: 10.1093/bib/bbad023. Brief Bioinform. 2023. PMID: 36682018

7

AlphaFold2 and its applications in the fields of biology and medicine.

Yang Z, Zeng X, Zhao Y, Chen R. Yang Z, et al. Among authors: zhao y. Signal Transduct Target Ther. 2023 Mar 14;8(1):115. doi: 10.1038/s41392-023-01381-z. Signal Transduct Target Ther. 2023. PMID: 36918529 Free PMC article. Review.

8

Drug screening and biomarker gene investigation in cancer therapy through the human transcriptional regulatory network.

He Z, Gao K, Dong L, Liu L, Qu X, Zou Z, Wu Y, Bu D, Guo JC, Zhao Y. He Z, et al. Among authors: zhao y. Comput Struct Biotechnol J. 2023 Feb 8;21:1557-1572. doi: 10.1016/j.csbj.2023.02.005. eCollection 2023. Comput Struct Biotechnol J. 2023. PMID: 36879883 Free PMC article.

9

Streamlining spatial omics data analysis with Pysodb.

Lin S, Zhao F, Wu Z, Yao J, Zhao Y, Yuan Z. Lin S, et al. Among authors: zhao y, zhao f. Nat Protoc. 2024 Mar;19(3):831-895. doi: 10.1038/s41596-023-00925-5. Epub 2023 Dec 22. Nat Protoc. 2024. PMID: 38135744 Review.

10

The interactome as a tree--an attempt to visualize the protein-protein interaction network in yeast.

Lu H, Zhu X, Liu H, Skogerbø G, Zhang J, Zhang Y, Cai L, Zhao Y, Sun S, Xu J, Bu D, Chen R. Lu H, et al. Among authors: zhao y. Nucleic Acids Res. 2004 Sep 8;32(16):4804-11. doi: 10.1093/nar/gkh814. Print 2004. Nucleic Acids Res. 2004. PMID: 15356297 Free PMC article.

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