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A complete reference genome for the soybean cv. Jack.
Huang Y, Koo DH, Mao Y, Herman EM, Zhang J, Schmidt MA. Huang Y, et al. Among authors: zhang j. Plant Commun. 2024 Feb 12;5(2):100765. doi: 10.1016/j.xplc.2023.100765. Epub 2023 Nov 14. Plant Commun. 2024. PMID: 37968906 Free PMC article. No abstract available.
Two gap-free reference genomes and a global view of the centromere architecture in rice.
Song JM, Xie WZ, Wang S, Guo YX, Koo DH, Kudrna D, Gong C, Huang Y, Feng JW, Zhang W, Zhou Y, Zuccolo A, Long E, Lee S, Talag J, Zhou R, Zhu XT, Yuan D, Udall J, Xie W, Wing RA, Zhang Q, Poland J, Zhang J, Chen LL. Song JM, et al. Among authors: zhang q, zhang w, zhang j. Mol Plant. 2021 Oct 4;14(10):1757-1767. doi: 10.1016/j.molp.2021.06.018. Epub 2021 Jun 24. Mol Plant. 2021. PMID: 34171480 Free article.
DEGAP: Dynamic elongation of a genome assembly path.
Huang Y, Wang Z, Schmidt MA, Su H, Xiong L, Zhang J. Huang Y, et al. Among authors: zhang j. Brief Bioinform. 2024 Mar 27;25(3):bbae194. doi: 10.1093/bib/bbae194. Brief Bioinform. 2024. PMID: 38670160 Free PMC article.
The chromosome-scale reference genome of safflower (Carthamus tinctorius) provides insights into linoleic acid and flavonoid biosynthesis.
Wu Z, Liu H, Zhan W, Yu Z, Qin E, Liu S, Yang T, Xiang N, Kudrna D, Chen Y, Lee S, Li G, Wing RA, Liu J, Xiong H, Xia C, Xing Y, Zhang J, Qin R. Wu Z, et al. Among authors: zhang j. Plant Biotechnol J. 2021 Sep;19(9):1725-1742. doi: 10.1111/pbi.13586. Epub 2021 Apr 8. Plant Biotechnol J. 2021. PMID: 33768699 Free PMC article.
Pan-genome inversion index reveals evolutionary insights into the subpopulation structure of Asian rice.
Zhou Y, Yu Z, Chebotarov D, Chougule K, Lu Z, Rivera LF, Kathiresan N, Al-Bader N, Mohammed N, Alsantely A, Mussurova S, Santos J, Thimma M, Troukhan M, Fornasiero A, Green CD, Copetti D, Kudrna D, Llaca V, Lorieux M, Zuccolo A, Ware D, McNally K, Zhang J, Wing RA. Zhou Y, et al. Among authors: zhang j. Nat Commun. 2023 Mar 21;14(1):1567. doi: 10.1038/s41467-023-37004-y. Nat Commun. 2023. PMID: 36944612 Free PMC article.
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