Zhang J - Search Results

1

Artificial intelligence reveals features associated with breast cancer neoadjuvant chemotherapy responses from multi-stain histopathologic images.

Huang Z, Shao W, Han Z, Alkashash AM, De la Sancha C, Parwani AV, Nitta H, Hou Y, Wang T, Salama P, Rizkalla M, Zhang J, Huang K, Li Z. Huang Z, et al. Among authors: zhang j. NPJ Precis Oncol. 2023 Jan 27;7(1):14. doi: 10.1038/s41698-023-00352-5. NPJ Precis Oncol. 2023. PMID: 36707660 Free PMC article.

2

Multi-dimensional discovery of biomarker and phenotype complexes.

Payne PR, Huang K, Keen-Circle K, Kundu A, Zhang J, Borlawsky TB. Payne PR, et al. Among authors: zhang j. BMC Bioinformatics. 2010 Oct 28;11 Suppl 9(Suppl 9):S3. doi: 10.1186/1471-2105-11-S9-S3. BMC Bioinformatics. 2010. PMID: 21044361 Free PMC article.

3

Using gene co-expression network analysis to predict biomarkers for chronic lymphocytic leukemia.

Zhang J, Xiang Y, Ding L, Keen-Circle K, Borlawsky TB, Ozer HG, Jin R, Payne P, Huang K. Zhang J, et al. BMC Bioinformatics. 2010 Oct 28;11 Suppl 9(Suppl 9):S5. doi: 10.1186/1471-2105-11-S9-S5. BMC Bioinformatics. 2010. PMID: 21044363 Free PMC article.

4

Identifying common genes and networks in multi-organ fibrosis.

Wenzke KE, Cantemir-Stone C, Zhang J, Marsh CB, Huang K. Wenzke KE, et al. Among authors: zhang j. AMIA Jt Summits Transl Sci Proc. 2012;2012:106-15. Epub 2012 Mar 19. AMIA Jt Summits Transl Sci Proc. 2012. PMID: 22779061 Free PMC article.

5

Promoters active in interphase are bookmarked during mitosis by ubiquitination.

Arora M, Zhang J, Heine GF, Ozer G, Liu HW, Huang K, Parvin JD. Arora M, et al. Among authors: zhang j. Nucleic Acids Res. 2012 Nov 1;40(20):10187-202. doi: 10.1093/nar/gks820. Epub 2012 Aug 31. Nucleic Acids Res. 2012. PMID: 22941662 Free PMC article.

6

Weighted frequent gene co-expression network mining to identify genes involved in genome stability.

Zhang J, Lu K, Xiang Y, Islam M, Kotian S, Kais Z, Lee C, Arora M, Liu HW, Parvin JD, Huang K. Zhang J, et al. PLoS Comput Biol. 2012;8(8):e1002656. doi: 10.1371/journal.pcbi.1002656. Epub 2012 Aug 30. PLoS Comput Biol. 2012. PMID: 22956898 Free PMC article.

7

Redistribution of H3K4me2 on neural tissue specific genes during mouse brain development.

Zhang J, Parvin J, Huang K. Zhang J, et al. BMC Genomics. 2012;13 Suppl 8(Suppl 8):S5. doi: 10.1186/1471-2164-13-S8-S5. Epub 2012 Dec 17. BMC Genomics. 2012. PMID: 23281639 Free PMC article.

8

Gene Co-expression analysis predicts genetic aberration loci associated with colon cancer metastasis.

Zhang J, Ni S, Xiang Y, Parvin JD, Yang Y, Zhou Y, Huang K. Zhang J, et al. Int J Comput Biol Drug Des. 2013;6(1-2):60-71. doi: 10.1504/IJCBDD.2013.052202. Epub 2013 Feb 21. Int J Comput Biol Drug Des. 2013. PMID: 23428474

9

Computational analysis of pathological images enables a better diagnosis of TFE3 Xp11.2 translocation renal cell carcinoma.

Cheng J, Han Z, Mehra R, Shao W, Cheng M, Feng Q, Ni D, Huang K, Cheng L, Zhang J. Cheng J, et al. Among authors: zhang j. Nat Commun. 2020 Apr 14;11(1):1778. doi: 10.1038/s41467-020-15671-5. Nat Commun. 2020. PMID: 32286325 Free PMC article.

10

MOGONET integrates multi-omics data using graph convolutional networks allowing patient classification and biomarker identification.

Wang T, Shao W, Huang Z, Tang H, Zhang J, Ding Z, Huang K. Wang T, et al. Among authors: zhang j. Nat Commun. 2021 Jun 8;12(1):3445. doi: 10.1038/s41467-021-23774-w. Nat Commun. 2021. PMID: 34103512 Free PMC article.

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