Zhang H - Search Results

1

Comprehensive enhancer-target gene assignments improve gene set level interpretation of genome-wide regulatory data.

Qin T, Lee C, Li S, Cavalcante RG, Orchard P, Yao H, Zhang H, Wang S, Patil S, Boyle AP, Sartor MA. Qin T, et al. Among authors: zhang h. Genome Biol. 2022 Apr 26;23(1):105. doi: 10.1186/s13059-022-02668-0. Genome Biol. 2022. PMID: 35473573 Free PMC article.

2

Heterogeneous digital biomarker integration out-performs patient self-reports in predicting Parkinson's disease.

Deng K, Li Y, Zhang H, Wang J, Albin RL, Guan Y. Deng K, et al. Among authors: zhang h. Commun Biol. 2022 Jan 17;5(1):58. doi: 10.1038/s42003-022-03002-x. Commun Biol. 2022. PMID: 35039601 Free PMC article.

3

Harmonizing across datasets to improve the transferability of drug combination prediction.

Zhang H, Wang Z, Nan Y, Zagidullin B, Yi D, Tang J, Guan Y. Zhang H, et al. Commun Biol. 2023 Apr 11;6(1):397. doi: 10.1038/s42003-023-04783-5. Commun Biol. 2023. PMID: 37041243 Free PMC article.

4

Protocol for using Ciclops to build models trained on cross-platform transcriptome data for clinical outcome prediction.

Chou E, Zhang H, Guan Y. Chou E, et al. Among authors: zhang h. STAR Protoc. 2022 Jul 20;3(3):101583. doi: 10.1016/j.xpro.2022.101583. eCollection 2022 Sep 16. STAR Protoc. 2022. PMID: 35880126 Free PMC article.

5

Auto-annotating sleep stages based on polysomnographic data.

Zhang H, Wang X, Li H, Mehendale S, Guan Y. Zhang H, et al. Patterns (N Y). 2021 Oct 28;3(1):100371. doi: 10.1016/j.patter.2021.100371. eCollection 2022 Jan 14. Patterns (N Y). 2021. PMID: 35079710 Free PMC article.

6

Machine learning for artemisinin resistance in malaria treatment across in vivo-in vitro platforms.

Zhang H, Guo J, Li H, Guan Y. Zhang H, et al. iScience. 2022 Feb 10;25(3):103910. doi: 10.1016/j.isci.2022.103910. eCollection 2022 Mar 18. iScience. 2022. PMID: 35243261 Free PMC article.

7

Deep Learning Identifies Digital Biomarkers for Self-Reported Parkinson's Disease.

Zhang H, Deng K, Li H, Albin RL, Guan Y. Zhang H, et al. Patterns (N Y). 2020 Jun 12;1(3):100042. doi: 10.1016/j.patter.2020.100042. Epub 2020 May 28. Patterns (N Y). 2020. PMID: 32699844 Free PMC article.

8

Timesias: A machine learning pipeline for predicting outcomes from time-series clinical records.

Zhang H, Yi D, Guan Y. Zhang H, et al. STAR Protoc. 2021 Jul 2;2(3):100639. doi: 10.1016/j.xpro.2021.100639. eCollection 2021 Sep 17. STAR Protoc. 2021. PMID: 34258599 Free PMC article.

9

ASOs are an effective treatment for disease-associated oligodendrocyte signatures in premanifest and symptomatic SCA3 mice.

Schuster KH, Zalon AJ, DiFranco DM, Putka AF, Stec NR, Jarrah SI, Naeem A, Haque Z, Zhang H, Guan Y, McLoughlin HS. Schuster KH, et al. Among authors: zhang h. Mol Ther. 2024 May 1;32(5):1359-1372. doi: 10.1016/j.ymthe.2024.02.033. Epub 2024 Feb 29. Mol Ther. 2024. PMID: 38429929

10

Benchmarked approaches for reconstruction of in vitro cell lineages and in silico models of C. elegans and M. musculus developmental trees.

Gong W, Granados AA, Hu J, Jones MG, Raz O, Salvador-Martínez I, Zhang H, Chow KK, Kwak IY, Retkute R, Prusokiene A, Prusokas A, Khodaverdian A, Zhang R, Rao S, Wang R, Rennert P, Saipradeep VG, Sivadasan N, Rao A, Joseph T, Srinivasan R, Peng J, Han L, Shang X, Garry DJ, Yu T, Chung V, Mason M, Liu Z, Guan Y, Yosef N, Shendure J, Telford MJ, Shapiro E, Elowitz MB, Meyer P. Gong W, et al. Among authors: zhang r, zhang h. Cell Syst. 2021 Aug 18;12(8):810-826.e4. doi: 10.1016/j.cels.2021.05.008. Epub 2021 Jun 18. Cell Syst. 2021. PMID: 34146472 Free article.

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