Zanghellini J - Search Results

1

The sources and transmission routes of microbial populations throughout a meat processing facility.

Zwirzitz B, Wetzels SU, Dixon ED, Stessl B, Zaiser A, Rabanser I, Thalguter S, Pinior B, Roch FF, Strachan C, Zanghellini J, Dzieciol M, Wagner M, Selberherr E. Zwirzitz B, et al. Among authors: zanghellini j. NPJ Biofilms Microbiomes. 2020 Jul 10;6(1):26. doi: 10.1038/s41522-020-0136-z. NPJ Biofilms Microbiomes. 2020. PMID: 32651393 Free PMC article.

2

Costs of ribosomal RNA stabilization affect ribosome composition at maximum growth rate.

Széliová D, Müller S, Zanghellini J. Széliová D, et al. Among authors: zanghellini j. Commun Biol. 2024 Feb 17;7(1):196. doi: 10.1038/s42003-024-05815-4. Commun Biol. 2024. PMID: 38368456 Free PMC article.

3

Environmental flexibility does not explain metabolic robustness.

Libiseller-Egger J, Coltman BL, Gerstl MP, Zanghellini J. Libiseller-Egger J, et al. Among authors: zanghellini j. NPJ Syst Biol Appl. 2020 Nov 27;6(1):39. doi: 10.1038/s41540-020-00155-5. NPJ Syst Biol Appl. 2020. PMID: 33247119 Free PMC article.

4

tEFMA: computing thermodynamically feasible elementary flux modes in metabolic networks.

Gerstl MP, Jungreuthmayer C, Zanghellini J. Gerstl MP, et al. Among authors: zanghellini j. Bioinformatics. 2015 Jul 1;31(13):2232-4. doi: 10.1093/bioinformatics/btv111. Epub 2015 Feb 19. Bioinformatics. 2015. PMID: 25701571

5

Metabolomics integrated elementary flux mode analysis in large metabolic networks.

Gerstl MP, Ruckerbauer DE, Mattanovich D, Jungreuthmayer C, Zanghellini J. Gerstl MP, et al. Among authors: zanghellini j. Sci Rep. 2015 Mar 10;5:8930. doi: 10.1038/srep08930. Sci Rep. 2015. PMID: 25754258 Free PMC article.

6

Avoiding the Enumeration of Infeasible Elementary Flux Modes by Including Transcriptional Regulatory Rules in the Enumeration Process Saves Computational Costs.

Jungreuthmayer C, Ruckerbauer DE, Gerstl MP, Hanscho M, Zanghellini J. Jungreuthmayer C, et al. Among authors: zanghellini j. PLoS One. 2015 Jun 19;10(6):e0129840. doi: 10.1371/journal.pone.0129840. eCollection 2015. PLoS One. 2015. PMID: 26091045 Free PMC article.

7

Exact quantification of cellular robustness in genome-scale metabolic networks.

Gerstl MP, Klamt S, Jungreuthmayer C, Zanghellini J. Gerstl MP, et al. Among authors: zanghellini j. Bioinformatics. 2016 Mar 1;32(5):730-7. doi: 10.1093/bioinformatics/btv649. Epub 2015 Nov 4. Bioinformatics. 2016. PMID: 26543173 Free PMC article.

8

Designing minimal microbial strains of desired functionality using a genetic algorithm.

Nair G, Jungreuthmayer C, Hanscho M, Zanghellini J. Nair G, et al. Among authors: zanghellini j. Algorithms Mol Biol. 2015 Dec 21;10:29. doi: 10.1186/s13015-015-0060-6. eCollection 2015. Algorithms Mol Biol. 2015. PMID: 26697103 Free PMC article.

9

Which sets of elementary flux modes form thermodynamically feasible flux distributions?

Gerstl MP, Jungreuthmayer C, Müller S, Zanghellini J. Gerstl MP, et al. Among authors: zanghellini j. FEBS J. 2016 May;283(9):1782-94. doi: 10.1111/febs.13702. Epub 2016 Mar 31. FEBS J. 2016. PMID: 26940826 Free PMC article.

10

What can mathematical modelling say about CHO metabolism and protein glycosylation?

Galleguillos SN, Ruckerbauer D, Gerstl MP, Borth N, Hanscho M, Zanghellini J. Galleguillos SN, et al. Among authors: zanghellini j. Comput Struct Biotechnol J. 2017 Jan 28;15:212-221. doi: 10.1016/j.csbj.2017.01.005. eCollection 2017. Comput Struct Biotechnol J. 2017. PMID: 28228925 Free PMC article. Review.

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