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Near-complete genome sequence of Lipomyces tetrasporous NRRL Y-64009, an oleaginous yeast capable of growing on lignocellulosic hydrolysates.
Jagtap SS, Liu J-J, Walukiewicz HE, Pangilinan J, Lipzen A, Ahrendt S, Koriabine M, Cobaugh K, Salamov A, Yoshinaga Y, Ng V, Daum C, Grigoriev IV, Slininger PJ, Dien BS, Jin Y-S, Rao CV. Jagtap SS, et al. Among authors: yoshinaga y. Microbiol Resour Announc. 2023 Nov 16;12(11):e0042623. doi: 10.1128/MRA.00426-23. Epub 2023 Oct 31. Microbiol Resour Announc. 2023. PMID: 37906027 Free PMC article.
Speciation Underpinned by Unexpected Molecular Diversity in the Mycorrhizal Fungal Genus Pisolithus.
Plett JM, Miyauchi S, Morin E, Plett K, Wong-Bajracharya J, de Freitas Pereira M, Kuo A, Henrissat B, Drula E, Wojtalewicz D, Riley R, Pangilinan J, Andreopoulos W, LaButti K, Daum C, Yoshinaga Y, Fauchery L, Ng V, Lipzen A, Barry K, Singan V, Guo J, Lebel T, Costa MD, Grigoriev IV, Martin F, Anderson IC, Kohler A. Plett JM, et al. Among authors: yoshinaga y. Mol Biol Evol. 2023 Mar 4;40(3):msad045. doi: 10.1093/molbev/msad045. Mol Biol Evol. 2023. PMID: 36811946 Free PMC article.
A thousand-genome panel retraces the global spread and adaptation of a major fungal crop pathogen.
Feurtey A, Lorrain C, McDonald MC, Milgate A, Solomon PS, Warren R, Puccetti G, Scalliet G, Torriani SFF, Gout L, Marcel TC, Suffert F, Alassimone J, Lipzen A, Yoshinaga Y, Daum C, Barry K, Grigoriev IV, Goodwin SB, Genissel A, Seidl MF, Stukenbrock EH, Lebrun MH, Kema GHJ, McDonald BA, Croll D. Feurtey A, et al. Among authors: yoshinaga y. Nat Commun. 2023 Feb 24;14(1):1059. doi: 10.1038/s41467-023-36674-y. Nat Commun. 2023. PMID: 36828814 Free PMC article.
Draft genome sequence of Yarrowia lipolytica NRRL Y-64008, an oleaginous yeast capable of growing on lignocellulosic hydrolysates.
Jagtap SS, Liu J-J, Walukiewicz HE, Riley R, Ahrendt S, Koriabine M, Cobaugh K, Salamov A, Yoshinaga Y, Ng V, Daum C, Grigoriev IV, Slininger PJ, Dien BS, Jin Y-S, Rao CV. Jagtap SS, et al. Among authors: yoshinaga y. Microbiol Resour Announc. 2023 Dec 14;12(12):e0043523. doi: 10.1128/MRA.00435-23. Epub 2023 Nov 20. Microbiol Resour Announc. 2023. PMID: 37982613 Free PMC article.
Metatranscriptomics sheds light on the links between the functional traits of fungal guilds and ecological processes in forest soil ecosystems.
Auer L, Buée M, Fauchery L, Lombard V, Barry KW, Clum A, Copeland A, Daum C, Foster B, LaButti K, Singan V, Yoshinaga Y, Martineau C, Alfaro M, Castillo FJ, Imbert JB, Ramírez L, Castanera R, Pisabarro AG, Finlay R, Lindahl B, Olson A, Séguin A, Kohler A, Henrissat B, Grigoriev IV, Martin FM. Auer L, et al. Among authors: yoshinaga y. New Phytol. 2024 May;242(4):1676-1690. doi: 10.1111/nph.19471. Epub 2023 Dec 26. New Phytol. 2024. PMID: 38148573
Expression quantitative trait loci mapping identified PtrXB38 as a key hub gene in adventitious root development in Populus.
Yao T, Zhang J, Yates TB, Shrestha HK, Engle NL, Ployet R, John C, Feng K, Bewg WP, Chen MSS, Lu H, Harding SA, Qiao Z, Jawdy SS, Shu M, Yuan W, Mozaffari K, Harman-Ware AE, Happs RM, York LM, Binder BM, Yoshinaga Y, Daum C, Tschaplinski TJ, Abraham PE, Tsai CJ, Barry K, Lipzen A, Schmutz J, Tuskan GA, Chen JG, Muchero W. Yao T, et al. Among authors: yoshinaga y. New Phytol. 2023 Sep;239(6):2248-2264. doi: 10.1111/nph.19126. Epub 2023 Jul 24. New Phytol. 2023. PMID: 37488708
238 results