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Draft Genome Sequence of a Rare Smut Relative, Tilletiaria anomala UBC 951.
Toome M, Kuo A, Henrissat B, Lipzen A, Tritt A, Yoshinaga Y, Zane M, Barry K, Grigoriev IV, Spatafora JW, Aime MC. Toome M, et al. Among authors: yoshinaga y. Genome Announc. 2014 Jun 12;2(3):e00539-14. doi: 10.1128/genomeA.00539-14. Genome Announc. 2014. PMID: 24926052 Free PMC article.
Comparative Genomics of Early-Diverging Mushroom-Forming Fungi Provides Insights into the Origins of Lignocellulose Decay Capabilities.
Nagy LG, Riley R, Tritt A, Adam C, Daum C, Floudas D, Sun H, Yadav JS, Pangilinan J, Larsson KH, Matsuura K, Barry K, Labutti K, Kuo R, Ohm RA, Bhattacharya SS, Shirouzu T, Yoshinaga Y, Martin FM, Grigoriev IV, Hibbett DS. Nagy LG, et al. Among authors: yoshinaga y. Mol Biol Evol. 2016 Apr;33(4):959-70. doi: 10.1093/molbev/msv337. Epub 2015 Dec 10. Mol Biol Evol. 2016. PMID: 26659563
Genome Sequencing.
Yoshinaga Y, Daum C, He G, O'Malley R. Yoshinaga Y, et al. Methods Mol Biol. 2018;1775:37-52. doi: 10.1007/978-1-4939-7804-5_4. Methods Mol Biol. 2018. PMID: 29876807
101 Dothideomycetes genomes: A test case for predicting lifestyles and emergence of pathogens.
Haridas S, Albert R, Binder M, Bloem J, LaButti K, Salamov A, Andreopoulos B, Baker SE, Barry K, Bills G, Bluhm BH, Cannon C, Castanera R, Culley DE, Daum C, Ezra D, González JB, Henrissat B, Kuo A, Liang C, Lipzen A, Lutzoni F, Magnuson J, Mondo SJ, Nolan M, Ohm RA, Pangilinan J, Park HJ, Ramírez L, Alfaro M, Sun H, Tritt A, Yoshinaga Y, Zwiers LH, Turgeon BG, Goodwin SB, Spatafora JW, Crous PW, Grigoriev IV. Haridas S, et al. Among authors: yoshinaga y. Stud Mycol. 2020 Feb 1;96:141-153. doi: 10.1016/j.simyco.2020.01.003. eCollection 2020 Jun. Stud Mycol. 2020. PMID: 32206138 Free PMC article.
Genomic mechanisms of climate adaptation in polyploid bioenergy switchgrass.
Lovell JT, MacQueen AH, Mamidi S, Bonnette J, Jenkins J, Napier JD, Sreedasyam A, Healey A, Session A, Shu S, Barry K, Bonos S, Boston L, Daum C, Deshpande S, Ewing A, Grabowski PP, Haque T, Harrison M, Jiang J, Kudrna D, Lipzen A, Pendergast TH 4th, Plott C, Qi P, Saski CA, Shakirov EV, Sims D, Sharma M, Sharma R, Stewart A, Singan VR, Tang Y, Thibivillier S, Webber J, Weng X, Williams M, Wu GA, Yoshinaga Y, Zane M, Zhang L, Zhang J, Behrman KD, Boe AR, Fay PA, Fritschi FB, Jastrow JD, Lloyd-Reilley J, Martínez-Reyna JM, Matamala R, Mitchell RB, Rouquette FM Jr, Ronald P, Saha M, Tobias CM, Udvardi M, Wing RA, Wu Y, Bartley LE, Casler M, Devos KM, Lowry DB, Rokhsar DS, Grimwood J, Juenger TE, Schmutz J. Lovell JT, et al. Among authors: yoshinaga y. Nature. 2021 Feb;590(7846):438-444. doi: 10.1038/s41586-020-03127-1. Epub 2021 Jan 27. Nature. 2021. PMID: 33505029 Free PMC article.
Near-Complete Genome Sequence of Zygosaccharomyces rouxii NRRL Y-64007, a Yeast Capable of Growing on Lignocellulosic Hydrolysates.
Jagtap SS, Liu JJ, Walukiewicz HE, Pangilinan J, Lipzen A, Ahrendt S, Koriabine M, Cobaugh K, Salamov A, Yoshinaga Y, Ng V, Daum C, Grigoriev IV, Slininger PJ, Dien BS, Jin YS, Rao CV. Jagtap SS, et al. Among authors: yoshinaga y. Microbiol Resour Announc. 2022 May 19;11(5):e0005022. doi: 10.1128/mra.00050-22. Epub 2022 Apr 20. Microbiol Resour Announc. 2022. PMID: 35442079 Free PMC article.
The genomic landscape of molecular responses to natural drought stress in Panicum hallii.
Lovell JT, Jenkins J, Lowry DB, Mamidi S, Sreedasyam A, Weng X, Barry K, Bonnette J, Campitelli B, Daum C, Gordon SP, Gould BA, Khasanova A, Lipzen A, MacQueen A, Palacio-Mejía JD, Plott C, Shakirov EV, Shu S, Yoshinaga Y, Zane M, Kudrna D, Talag JD, Rokhsar D, Grimwood J, Schmutz J, Juenger TE. Lovell JT, et al. Among authors: yoshinaga y. Nat Commun. 2018 Dec 6;9(1):5213. doi: 10.1038/s41467-018-07669-x. Nat Commun. 2018. PMID: 30523281 Free PMC article.
238 results